Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm45113-201ENSMUST00000207518 165 ntBASIC14.09□□□□□ -0.15
NpcdF8VQB8 Gm19046-201ENSMUST00000221263 1298 ntBASIC14.09□□□□□ -0.15
NpcdF8VQB8 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NpcdF8VQB8 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NpcdF8VQB8 Gm18798-201ENSMUST00000187264 1700 ntBASIC14.09□□□□□ -0.15
NpcdF8VQB8 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NpcdF8VQB8 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
NpcdF8VQB8 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NpcdF8VQB8 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.09□□□□□ -0.15
NpcdF8VQB8 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NpcdF8VQB8 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NpcdF8VQB8 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NpcdF8VQB8 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
NpcdF8VQB8 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC14.08□□□□□ -0.15
NpcdF8VQB8 Gm43417-201ENSMUST00000201586 5207 ntBASIC14.08□□□□□ -0.15
NpcdF8VQB8 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
NpcdF8VQB8 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
NpcdF8VQB8 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
NpcdF8VQB8 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NpcdF8VQB8 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NpcdF8VQB8 AC166574.4-201ENSMUST00000227165 1937 ntBASIC14.08□□□□□ -0.16
NpcdF8VQB8 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
NpcdF8VQB8 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NpcdF8VQB8 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NpcdF8VQB8 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NpcdF8VQB8 Gm11619-201ENSMUST00000117474 237 ntBASIC14.08□□□□□ -0.16
NpcdF8VQB8 Gm12663-201ENSMUST00000118481 958 ntBASIC14.08□□□□□ -0.16
NpcdF8VQB8 Gm14034-201ENSMUST00000120147 551 ntBASIC14.08□□□□□ -0.16
NpcdF8VQB8 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NpcdF8VQB8 Gm25554-201ENSMUST00000158075 113 ntBASIC14.08□□□□□ -0.16
NpcdF8VQB8 Gm23400-201ENSMUST00000174994 102 ntBASIC14.08□□□□□ -0.16
NpcdF8VQB8 Gm26463-201ENSMUST00000175065 101 ntBASIC14.08□□□□□ -0.16
NpcdF8VQB8 Gm24332-201ENSMUST00000175102 102 ntBASIC14.08□□□□□ -0.16
NpcdF8VQB8 Gm25959-201ENSMUST00000175112 102 ntBASIC14.08□□□□□ -0.16
NpcdF8VQB8 Gm22475-201ENSMUST00000175169 102 ntBASIC14.08□□□□□ -0.16
NpcdF8VQB8 Gm22903-201ENSMUST00000175193 102 ntBASIC14.08□□□□□ -0.16
NpcdF8VQB8 Gm25070-201ENSMUST00000175237 102 ntBASIC14.08□□□□□ -0.16
NpcdF8VQB8 Gm24159-201ENSMUST00000175264 102 ntBASIC14.08□□□□□ -0.16
NpcdF8VQB8 Gm25299-201ENSMUST00000175283 102 ntBASIC14.08□□□□□ -0.16
NpcdF8VQB8 Gm23798-201ENSMUST00000175560 102 ntBASIC14.08□□□□□ -0.16
NpcdF8VQB8 Gm23802-201ENSMUST00000175565 102 ntBASIC14.08□□□□□ -0.16
NpcdF8VQB8 Gm10807-201ENSMUST00000177134 795 ntBASIC14.08□□□□□ -0.16
NpcdF8VQB8 Gm25708-201ENSMUST00000177687 102 ntBASIC14.08□□□□□ -0.16
NpcdF8VQB8 Gm24370-201ENSMUST00000178007 102 ntBASIC14.08□□□□□ -0.16
NpcdF8VQB8 Gm23049-201ENSMUST00000178068 102 ntBASIC14.08□□□□□ -0.16
NpcdF8VQB8 Gm28019-201ENSMUST00000178138 101 ntBASIC14.08□□□□□ -0.16
NpcdF8VQB8 Gm25571-201ENSMUST00000178322 102 ntBASIC14.08□□□□□ -0.16
NpcdF8VQB8 Gm25355-201ENSMUST00000178456 101 ntBASIC14.08□□□□□ -0.16
NpcdF8VQB8 Gm24975-201ENSMUST00000178492 101 ntBASIC14.08□□□□□ -0.16
NpcdF8VQB8 Gm23189-201ENSMUST00000178954 102 ntBASIC14.08□□□□□ -0.16
NpcdF8VQB8 Gm25100-201ENSMUST00000179750 101 ntBASIC14.08□□□□□ -0.16
NpcdF8VQB8 Gm23064-201ENSMUST00000179866 101 ntBASIC14.08□□□□□ -0.16
NpcdF8VQB8 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NpcdF8VQB8 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC14.08□□□□□ -0.16
NpcdF8VQB8 Gm39288-201ENSMUST00000210554 446 ntBASIC14.08□□□□□ -0.16
NpcdF8VQB8 CT010486.3-201ENSMUST00000224555 811 ntBASIC14.08□□□□□ -0.16
NpcdF8VQB8 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NpcdF8VQB8 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NpcdF8VQB8 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NpcdF8VQB8 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NpcdF8VQB8 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NpcdF8VQB8 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NpcdF8VQB8 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NpcdF8VQB8 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NpcdF8VQB8 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Gm6450-201ENSMUST00000200896 574 ntBASIC14.07□□□□□ -0.16
NpcdF8VQB8 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC14.07□□□□□ -0.16
NpcdF8VQB8 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.07□□□□□ -0.16
NpcdF8VQB8 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.07□□□□□ -0.16
NpcdF8VQB8 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms