Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Gm38117-201ENSMUST00000194653 939 ntBASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Gm5982-201ENSMUST00000196234 512 ntBASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Gm44967-201ENSMUST00000207047 631 ntBASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Gm6082-201ENSMUST00000215204 454 ntBASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 BC043934-202ENSMUST00000185694 2356 ntBASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Gm13296-201ENSMUST00000117854 997 ntBASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Gm25890-201ENSMUST00000177643 165 ntBASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Gm22614-201ENSMUST00000178300 165 ntBASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Rps4l-202ENSMUST00000204242 789 ntBASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Gm22042-201ENSMUST00000082989 165 ntBASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Gm26110-201ENSMUST00000083971 165 ntBASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh9F8VPK8 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms