Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Gm4986-201ENSMUST00000119731 549 ntBASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Mospd4-201ENSMUST00000180618 576 ntBASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Gm43118-201ENSMUST00000199149 775 ntBASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh1F7BJK1 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 AC131068.2-201ENSMUST00000226175 1453 ntBASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Gm23931-201ENSMUST00000103842 109 ntBASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms