Protein–RNA interactions for Protein: E9PUL3

Clca3b, Chloride channel accessory 3B, mousemouse

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3bE9PUL3 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Gm12616-201ENSMUST00000118594 382 ntBASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Gm11244-201ENSMUST00000121243 237 ntBASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Gm12624-201ENSMUST00000177615 382 ntBASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Gm12621-201ENSMUST00000177760 382 ntBASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Gm12615-201ENSMUST00000177970 382 ntBASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Gm12622-201ENSMUST00000177975 382 ntBASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Gm12627-201ENSMUST00000178412 382 ntBASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Gm12625-201ENSMUST00000179122 382 ntBASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Gm12614-201ENSMUST00000179586 382 ntBASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Gm12613-201ENSMUST00000180323 382 ntBASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Gm8285-201ENSMUST00000208293 759 ntBASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clca3bE9PUL3 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clca3bE9PUL3 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Clca3bE9PUL3 Gm44999-201ENSMUST00000207456 1493 ntBASIC12.53□□□□□ -0.4
Clca3bE9PUL3 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clca3bE9PUL3 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Clca3bE9PUL3 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clca3bE9PUL3 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clca3bE9PUL3 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.53□□□□□ -0.4
Clca3bE9PUL3 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clca3bE9PUL3 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clca3bE9PUL3 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clca3bE9PUL3 Gm16071-201ENSMUST00000119589 793 ntBASIC12.53□□□□□ -0.4
Clca3bE9PUL3 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Clca3bE9PUL3 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Clca3bE9PUL3 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Clca3bE9PUL3 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clca3bE9PUL3 Gm17826-201ENSMUST00000189720 798 ntBASIC12.53□□□□□ -0.4
Clca3bE9PUL3 Gm37299-201ENSMUST00000193951 826 ntBASIC12.53□□□□□ -0.4
Clca3bE9PUL3 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.53□□□□□ -0.4
Clca3bE9PUL3 Gm43002-201ENSMUST00000200310 155 ntBASIC12.53□□□□□ -0.4
Clca3bE9PUL3 Gm9132-201ENSMUST00000210182 832 ntBASIC12.53□□□□□ -0.4
Clca3bE9PUL3 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Clca3bE9PUL3 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.53□□□□□ -0.4
Clca3bE9PUL3 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.53□□□□□ -0.4
Clca3bE9PUL3 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clca3bE9PUL3 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Clca3bE9PUL3 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clca3bE9PUL3 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clca3bE9PUL3 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clca3bE9PUL3 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Clca3bE9PUL3 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clca3bE9PUL3 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.53□□□□□ -0.4
Clca3bE9PUL3 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Clca3bE9PUL3 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Clca3bE9PUL3 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clca3bE9PUL3 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Clca3bE9PUL3 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.53□□□□□ -0.4
Clca3bE9PUL3 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clca3bE9PUL3 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clca3bE9PUL3 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clca3bE9PUL3 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Clca3bE9PUL3 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Clca3bE9PUL3 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Clca3bE9PUL3 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms