Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Gm9136-201ENSMUST00000193368 454 ntBASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Gm6218-201ENSMUST00000219812 628 ntBASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Epb41l4a-201ENSMUST00000025234 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Gm14005-209ENSMUST00000224993 1832 ntBASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Als2-201ENSMUST00000027178 6342 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Dusp16-202ENSMUST00000129433 3993 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 N6amt1-204ENSMUST00000120284 3473 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 AC125374.1-201ENSMUST00000213573 1400 ntBASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Gm14057-201ENSMUST00000120631 482 ntBASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Gm27243-201ENSMUST00000183964 521 ntBASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 AC125117.1-201ENSMUST00000228121 468 ntBASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Gm5867-201ENSMUST00000063197 592 ntBASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Pomgnt1-204ENSMUST00000120083 2953 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Gm44369-201ENSMUST00000204543 2175 ntBASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Gm43143-201ENSMUST00000196083 2023 ntBASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trav8-1A0A075B641 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms