Protein–RNA interactions for Protein: Q9Z2D8

Mbd3, Methyl-CpG-binding domain protein 3, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3Q9Z2D8 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Mbd3Q9Z2D8 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mbd3Q9Z2D8 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Mbd3Q9Z2D8 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mbd3Q9Z2D8 Gm12463-201ENSMUST00000118271 849 ntBASIC14.8□□□□□ -0.04
Mbd3Q9Z2D8 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mbd3Q9Z2D8 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Mbd3Q9Z2D8 Gm27046-201ENSMUST00000182160 463 ntBASIC14.8□□□□□ -0.04
Mbd3Q9Z2D8 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC14.8□□□□□ -0.04
Mbd3Q9Z2D8 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mbd3Q9Z2D8 Rps4l-202ENSMUST00000204242 789 ntBASIC14.8□□□□□ -0.04
Mbd3Q9Z2D8 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC14.8□□□□□ -0.04
Mbd3Q9Z2D8 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mbd3Q9Z2D8 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mbd3Q9Z2D8 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mbd3Q9Z2D8 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC14.8□□□□□ -0.04
Mbd3Q9Z2D8 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Mbd3Q9Z2D8 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mbd3Q9Z2D8 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Mbd3Q9Z2D8 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mbd3Q9Z2D8 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Mbd3Q9Z2D8 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC14.8□□□□□ -0.04
Mbd3Q9Z2D8 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mbd3Q9Z2D8 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Mbd3Q9Z2D8 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mbd3Q9Z2D8 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Mbd3Q9Z2D8 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mbd3Q9Z2D8 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Mbd3Q9Z2D8 Gm14005-209ENSMUST00000224993 1832 ntBASIC14.8□□□□□ -0.04
Mbd3Q9Z2D8 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mbd3Q9Z2D8 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Mbd3Q9Z2D8 Gm44415-201ENSMUST00000204151 2112 ntBASIC14.8□□□□□ -0.04
Mbd3Q9Z2D8 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Mbd3Q9Z2D8 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mbd3Q9Z2D8 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mbd3Q9Z2D8 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC14.79□□□□□ -0.04
Mbd3Q9Z2D8 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3Q9Z2D8 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC14.79□□□□□ -0.04
Mbd3Q9Z2D8 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3Q9Z2D8 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3Q9Z2D8 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3Q9Z2D8 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.79□□□□□ -0.04
Mbd3Q9Z2D8 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Mbd3Q9Z2D8 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3Q9Z2D8 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Mbd3Q9Z2D8 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3Q9Z2D8 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3Q9Z2D8 Gm38117-201ENSMUST00000194653 939 ntBASIC14.79□□□□□ -0.04
Mbd3Q9Z2D8 Gm42629-201ENSMUST00000199063 1102 ntBASIC14.79□□□□□ -0.04
Mbd3Q9Z2D8 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Mbd3Q9Z2D8 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC14.79□□□□□ -0.04
Mbd3Q9Z2D8 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3Q9Z2D8 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14.79□□□□□ -0.04
Mbd3Q9Z2D8 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3Q9Z2D8 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3Q9Z2D8 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3Q9Z2D8 Gm9823-201ENSMUST00000051212 327 ntBASIC14.79□□□□□ -0.04
Mbd3Q9Z2D8 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Mbd3Q9Z2D8 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3Q9Z2D8 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3Q9Z2D8 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Mbd3Q9Z2D8 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3Q9Z2D8 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Mbd3Q9Z2D8 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3Q9Z2D8 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3Q9Z2D8 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3Q9Z2D8 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3Q9Z2D8 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3Q9Z2D8 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3Q9Z2D8 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3Q9Z2D8 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Mbd3Q9Z2D8 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3Q9Z2D8 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3Q9Z2D8 Gm33366-201ENSMUST00000195583 3827 ntBASIC14.78□□□□□ -0.04
Mbd3Q9Z2D8 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3Q9Z2D8 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3Q9Z2D8 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3Q9Z2D8 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3Q9Z2D8 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC14.78□□□□□ -0.04
Mbd3Q9Z2D8 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3Q9Z2D8 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3Q9Z2D8 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3Q9Z2D8 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3Q9Z2D8 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.78□□□□□ -0.04
Mbd3Q9Z2D8 Gm18935-201ENSMUST00000212692 664 ntBASIC14.78□□□□□ -0.04
Mbd3Q9Z2D8 AC160929.1-201ENSMUST00000221247 415 ntBASIC14.78□□□□□ -0.04
Mbd3Q9Z2D8 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3Q9Z2D8 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3Q9Z2D8 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3Q9Z2D8 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3Q9Z2D8 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3Q9Z2D8 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3Q9Z2D8 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3Q9Z2D8 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3Q9Z2D8 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Mbd3Q9Z2D8 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3Q9Z2D8 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3Q9Z2D8 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3Q9Z2D8 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3Q9Z2D8 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms