Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ube3bQ9ES34 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ube3bQ9ES34 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ube3bQ9ES34 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ube3bQ9ES34 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ube3bQ9ES34 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ube3bQ9ES34 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ube3bQ9ES34 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ube3bQ9ES34 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Gm23771-201ENSMUST00000178702 110 ntBASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Gm19080-201ENSMUST00000196082 550 ntBASIC13.91□□□□□ -0.18
Ube3bQ9ES34 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Gm17917-201ENSMUST00000218561 953 ntBASIC13.91□□□□□ -0.18
Ube3bQ9ES34 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Gm6430-201ENSMUST00000054664 1248 ntBASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Gm5451-201ENSMUST00000080545 579 ntBASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ube3bQ9ES34 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Gm23272-201ENSMUST00000104053 129 ntBASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Gm25076-201ENSMUST00000104098 132 ntBASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Gm14201-201ENSMUST00000117627 289 ntBASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Gm15615-201ENSMUST00000118876 198 ntBASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Gm14942-201ENSMUST00000119642 336 ntBASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Gm14460-201ENSMUST00000121511 639 ntBASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Mir3547-201ENSMUST00000175461 88 ntBASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Gm27910-201ENSMUST00000185004 107 ntBASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Gm3551-201ENSMUST00000190750 664 ntBASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Gm9645-201ENSMUST00000197131 792 ntBASIC13.9□□□□□ -0.18
Ube3bQ9ES34 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Gm17825-201ENSMUST00000206836 794 ntBASIC13.9□□□□□ -0.18
Ube3bQ9ES34 CT485606.1-201ENSMUST00000213187 878 ntBASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 AC155266.1-201ENSMUST00000220762 904 ntBASIC13.9□□□□□ -0.18
Ube3bQ9ES34 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Gm29787-201ENSMUST00000222129 849 ntBASIC13.9□□□□□ -0.18
Ube3bQ9ES34 CT573047.1-201ENSMUST00000223652 851 ntBASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms