Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Gm13035-201ENSMUST00000117496 342 ntBASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 B9d1os-201ENSMUST00000137010 674 ntBASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Gm18734-201ENSMUST00000172937 808 ntBASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2aQ9DB34 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Gm15207-201ENSMUST00000119259 442 ntBASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Mir5132-201ENSMUST00000175166 71 ntBASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Gm8100-201ENSMUST00000182906 988 ntBASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Gm9192-201ENSMUST00000183221 985 ntBASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Gm5733-201ENSMUST00000190232 939 ntBASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Dopey2-207ENSMUST00000227156 7340 ntBASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2aQ9DB34 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms