Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.36□□□□□ -0.43
Vps33aQ9D2N9 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.36□□□□□ -0.43
Vps33aQ9D2N9 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps33aQ9D2N9 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps33aQ9D2N9 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vps33aQ9D2N9 Gm2423-201ENSMUST00000074863 733 ntBASIC12.36□□□□□ -0.43
Vps33aQ9D2N9 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Vps33aQ9D2N9 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps33aQ9D2N9 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Vps33aQ9D2N9 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vps33aQ9D2N9 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps33aQ9D2N9 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Vps33aQ9D2N9 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps33aQ9D2N9 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps33aQ9D2N9 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps33aQ9D2N9 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps33aQ9D2N9 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps33aQ9D2N9 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Vps33aQ9D2N9 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vps33aQ9D2N9 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps33aQ9D2N9 Gm38357-201ENSMUST00000195382 2464 ntBASIC12.35□□□□□ -0.43
Vps33aQ9D2N9 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps33aQ9D2N9 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps33aQ9D2N9 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Vps33aQ9D2N9 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC12.35□□□□□ -0.43
Vps33aQ9D2N9 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps33aQ9D2N9 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vps33aQ9D2N9 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps33aQ9D2N9 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Vps33aQ9D2N9 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Vps33aQ9D2N9 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.35□□□□□ -0.43
Vps33aQ9D2N9 Gm12363-201ENSMUST00000122250 668 ntBASIC12.35□□□□□ -0.43
Vps33aQ9D2N9 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.35□□□□□ -0.43
Vps33aQ9D2N9 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vps33aQ9D2N9 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.35□□□□□ -0.43
Vps33aQ9D2N9 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.35□□□□□ -0.43
Vps33aQ9D2N9 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vps33aQ9D2N9 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.35□□□□□ -0.43
Vps33aQ9D2N9 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps33aQ9D2N9 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.35□□□□□ -0.43
Vps33aQ9D2N9 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vps33aQ9D2N9 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps33aQ9D2N9 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vps33aQ9D2N9 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC12.35□□□□□ -0.43
Vps33aQ9D2N9 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Vps33aQ9D2N9 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps33aQ9D2N9 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps33aQ9D2N9 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vps33aQ9D2N9 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps33aQ9D2N9 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 AC107453.4-201ENSMUST00000227068 1817 ntBASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Gm28911-201ENSMUST00000188837 117 ntBASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Gm45930-201ENSMUST00000221330 292 ntBASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Gm45041-201ENSMUST00000207366 3108 ntBASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps33aQ9D2N9 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Vps33aQ9D2N9 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vps33aQ9D2N9 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps33aQ9D2N9 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms