Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC12.02□□□□□ -0.49
Snf8Q9CZ28 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.02□□□□□ -0.49
Snf8Q9CZ28 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Snf8Q9CZ28 Gm13392-201ENSMUST00000117708 150 ntBASIC12.02□□□□□ -0.49
Snf8Q9CZ28 Gm13297-201ENSMUST00000120205 934 ntBASIC12.02□□□□□ -0.49
Snf8Q9CZ28 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Snf8Q9CZ28 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.02□□□□□ -0.49
Snf8Q9CZ28 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.02□□□□□ -0.49
Snf8Q9CZ28 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.02□□□□□ -0.49
Snf8Q9CZ28 Gm18054-201ENSMUST00000207539 555 ntBASIC12.02□□□□□ -0.49
Snf8Q9CZ28 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.02□□□□□ -0.49
Snf8Q9CZ28 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Snf8Q9CZ28 Gm8712-201ENSMUST00000221090 701 ntBASIC12.02□□□□□ -0.49
Snf8Q9CZ28 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Snf8Q9CZ28 Gm9823-201ENSMUST00000051212 327 ntBASIC12.02□□□□□ -0.49
Snf8Q9CZ28 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Snf8Q9CZ28 Gm10478-201ENSMUST00000084451 396 ntBASIC12.02□□□□□ -0.49
Snf8Q9CZ28 Erich3-203ENSMUST00000189969 3460 ntBASIC12.02□□□□□ -0.49
Snf8Q9CZ28 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Snf8Q9CZ28 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Snf8Q9CZ28 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Snf8Q9CZ28 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Snf8Q9CZ28 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Snf8Q9CZ28 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Snf8Q9CZ28 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Snf8Q9CZ28 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Snf8Q9CZ28 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Snf8Q9CZ28 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Snf8Q9CZ28 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Gm12015-201ENSMUST00000117065 843 ntBASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Gm13326-201ENSMUST00000118730 1011 ntBASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Gm11793-201ENSMUST00000120433 981 ntBASIC12.01□□□□□ -0.49
Snf8Q9CZ28 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Gm8956-201ENSMUST00000203939 825 ntBASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Gm4607-201ENSMUST00000206649 577 ntBASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Gm7046-201ENSMUST00000221351 977 ntBASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 AC125374.1-201ENSMUST00000213573 1400 ntBASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Snf8Q9CZ28 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12□□□□□ -0.49
Snf8Q9CZ28 Gm38292-201ENSMUST00000192646 3045 ntBASIC12□□□□□ -0.49
Snf8Q9CZ28 Gm43807-201ENSMUST00000200678 1781 ntBASIC12□□□□□ -0.49
Snf8Q9CZ28 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Snf8Q9CZ28 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Snf8Q9CZ28 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Snf8Q9CZ28 Gm6157-201ENSMUST00000199935 1897 ntBASIC12□□□□□ -0.49
Snf8Q9CZ28 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Snf8Q9CZ28 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12□□□□□ -0.49
Snf8Q9CZ28 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Snf8Q9CZ28 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Snf8Q9CZ28 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12□□□□□ -0.49
Snf8Q9CZ28 Gm11511-201ENSMUST00000118146 540 ntBASIC12□□□□□ -0.49
Snf8Q9CZ28 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12□□□□□ -0.49
Snf8Q9CZ28 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12□□□□□ -0.49
Snf8Q9CZ28 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Snf8Q9CZ28 Gm26956-201ENSMUST00000182176 986 ntBASIC12□□□□□ -0.49
Snf8Q9CZ28 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12□□□□□ -0.49
Snf8Q9CZ28 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12□□□□□ -0.49
Snf8Q9CZ28 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12□□□□□ -0.49
Snf8Q9CZ28 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Snf8Q9CZ28 AC153954.1-201ENSMUST00000216959 255 ntBASIC12□□□□□ -0.49
Snf8Q9CZ28 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 272 ms