Protein–RNA interactions for Protein: Q9CQC0

Tpbpb, Trophoblast-specific protein beta, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpbQ9CQC0 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
TpbpbQ9CQC0 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
TpbpbQ9CQC0 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
TpbpbQ9CQC0 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
TpbpbQ9CQC0 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
TpbpbQ9CQC0 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
TpbpbQ9CQC0 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
TpbpbQ9CQC0 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
TpbpbQ9CQC0 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
TpbpbQ9CQC0 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
TpbpbQ9CQC0 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
TpbpbQ9CQC0 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
TpbpbQ9CQC0 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
TpbpbQ9CQC0 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
TpbpbQ9CQC0 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Gm2639-201ENSMUST00000156881 1297 ntBASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Zscan30-202ENSMUST00000224144 1458 ntBASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TpbpbQ9CQC0 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 Gm24548-201ENSMUST00000158650 108 ntBASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
TpbpbQ9CQC0 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms