Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Gm12390-201ENSMUST00000117897 397 ntBASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Gm5419-201ENSMUST00000119301 527 ntBASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Gm10254-201ENSMUST00000052888 867 ntBASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Zscan30-202ENSMUST00000224144 1458 ntBASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.53□□□□□ -0.72
Krt88Q9CPR6 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.52□□□□□ -0.72
Krt88Q9CPR6 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Krt88Q9CPR6 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.52□□□□□ -0.72
Krt88Q9CPR6 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Krt88Q9CPR6 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Krt88Q9CPR6 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Krt88Q9CPR6 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.72
Krt88Q9CPR6 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.52□□□□□ -0.72
Krt88Q9CPR6 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.52□□□□□ -0.72
Krt88Q9CPR6 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Krt88Q9CPR6 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Gm8835-201ENSMUST00000173096 1169 ntBASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Gm6222-202ENSMUST00000182143 629 ntBASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Mir7085-201ENSMUST00000184353 66 ntBASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Gm38314-201ENSMUST00000195709 625 ntBASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms