Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.41□□□□□ -0.74
Thumpd1Q99J36 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Thumpd1Q99J36 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Gm11478-201ENSMUST00000117851 599 ntBASIC10.4□□□□□ -0.74
Thumpd1Q99J36 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Thumpd1Q99J36 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Thumpd1Q99J36 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC10.4□□□□□ -0.75
Thumpd1Q99J36 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Thumpd1Q99J36 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Thumpd1Q99J36 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Thumpd1Q99J36 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Thumpd1Q99J36 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Thumpd1Q99J36 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Thumpd1Q99J36 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Thumpd1Q99J36 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Thumpd1Q99J36 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Thumpd1Q99J36 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Thumpd1Q99J36 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Thumpd1Q99J36 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Thumpd1Q99J36 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Thumpd1Q99J36 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Thumpd1Q99J36 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Thumpd1Q99J36 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.39□□□□□ -0.75
Thumpd1Q99J36 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Thumpd1Q99J36 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Thumpd1Q99J36 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.39□□□□□ -0.75
Thumpd1Q99J36 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Thumpd1Q99J36 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Thumpd1Q99J36 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Thumpd1Q99J36 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Thumpd1Q99J36 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Thumpd1Q99J36 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Thumpd1Q99J36 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Thumpd1Q99J36 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Thumpd1Q99J36 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Thumpd1Q99J36 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Thumpd1Q99J36 Gm12490-201ENSMUST00000120255 560 ntBASIC10.39□□□□□ -0.75
Thumpd1Q99J36 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Thumpd1Q99J36 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Thumpd1Q99J36 Gm9230-201ENSMUST00000188228 532 ntBASIC10.39□□□□□ -0.75
Thumpd1Q99J36 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Thumpd1Q99J36 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Thumpd1Q99J36 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Thumpd1Q99J36 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC10.39□□□□□ -0.75
Thumpd1Q99J36 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Thumpd1Q99J36 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Thumpd1Q99J36 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms