Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trex1Q91XB0 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.36□□□□□ -0.27
Trex1Q91XB0 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC13.36□□□□□ -0.27
Trex1Q91XB0 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.36□□□□□ -0.27
Trex1Q91XB0 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trex1Q91XB0 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trex1Q91XB0 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trex1Q91XB0 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trex1Q91XB0 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trex1Q91XB0 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trex1Q91XB0 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trex1Q91XB0 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trex1Q91XB0 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trex1Q91XB0 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Trex1Q91XB0 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trex1Q91XB0 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trex1Q91XB0 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trex1Q91XB0 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trex1Q91XB0 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trex1Q91XB0 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Trex1Q91XB0 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC13.35□□□□□ -0.27
Trex1Q91XB0 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC13.35□□□□□ -0.27
Trex1Q91XB0 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trex1Q91XB0 Gm13422-201ENSMUST00000118834 504 ntBASIC13.35□□□□□ -0.27
Trex1Q91XB0 Gm10169-201ENSMUST00000121822 348 ntBASIC13.35□□□□□ -0.27
Trex1Q91XB0 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trex1Q91XB0 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC13.35□□□□□ -0.27
Trex1Q91XB0 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC13.35□□□□□ -0.27
Trex1Q91XB0 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC13.35□□□□□ -0.27
Trex1Q91XB0 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trex1Q91XB0 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Trex1Q91XB0 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trex1Q91XB0 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC13.35□□□□□ -0.27
Trex1Q91XB0 CT010506.1-201ENSMUST00000223673 349 ntBASIC13.35□□□□□ -0.27
Trex1Q91XB0 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trex1Q91XB0 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC13.35□□□□□ -0.27
Trex1Q91XB0 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trex1Q91XB0 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Trex1Q91XB0 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trex1Q91XB0 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trex1Q91XB0 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trex1Q91XB0 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.35□□□□□ -0.27
Trex1Q91XB0 Gm43773-201ENSMUST00000198548 2162 ntBASIC13.35□□□□□ -0.27
Trex1Q91XB0 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trex1Q91XB0 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trex1Q91XB0 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trex1Q91XB0 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trex1Q91XB0 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.34□□□□□ -0.27
Trex1Q91XB0 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trex1Q91XB0 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trex1Q91XB0 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC13.34□□□□□ -0.27
Trex1Q91XB0 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trex1Q91XB0 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trex1Q91XB0 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trex1Q91XB0 Gm7278-201ENSMUST00000119836 1401 ntBASIC13.34□□□□□ -0.27
Trex1Q91XB0 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trex1Q91XB0 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Trex1Q91XB0 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trex1Q91XB0 Gm11500-201ENSMUST00000118237 601 ntBASIC13.34□□□□□ -0.27
Trex1Q91XB0 Gm11422-201ENSMUST00000118925 1103 ntBASIC13.34□□□□□ -0.27
Trex1Q91XB0 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC13.34□□□□□ -0.27
Trex1Q91XB0 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC13.34□□□□□ -0.27
Trex1Q91XB0 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC13.34□□□□□ -0.27
Trex1Q91XB0 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC13.34□□□□□ -0.27
Trex1Q91XB0 Gm43380-201ENSMUST00000200421 220 ntBASIC13.34□□□□□ -0.27
Trex1Q91XB0 Gm5298-201ENSMUST00000201122 892 ntBASIC13.34□□□□□ -0.27
Trex1Q91XB0 Gm8436-201ENSMUST00000210152 1080 ntBASIC13.34□□□□□ -0.27
Trex1Q91XB0 Gm5749-201ENSMUST00000210673 1090 ntBASIC13.34□□□□□ -0.27
Trex1Q91XB0 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC13.34□□□□□ -0.27
Trex1Q91XB0 Gm18065-201ENSMUST00000221395 526 ntBASIC13.34□□□□□ -0.27
Trex1Q91XB0 AC129308.3-201ENSMUST00000225652 524 ntBASIC13.34□□□□□ -0.27
Trex1Q91XB0 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trex1Q91XB0 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Trex1Q91XB0 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trex1Q91XB0 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.34□□□□□ -0.27
Trex1Q91XB0 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trex1Q91XB0 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trex1Q91XB0 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trex1Q91XB0 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Trex1Q91XB0 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trex1Q91XB0 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trex1Q91XB0 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trex1Q91XB0 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.34□□□□□ -0.27
Trex1Q91XB0 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trex1Q91XB0 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trex1Q91XB0 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trex1Q91XB0 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trex1Q91XB0 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Trex1Q91XB0 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Trex1Q91XB0 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Trex1Q91XB0 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC13.33□□□□□ -0.27
Trex1Q91XB0 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trex1Q91XB0 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trex1Q91XB0 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trex1Q91XB0 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.27
Trex1Q91XB0 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trex1Q91XB0 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trex1Q91XB0 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trex1Q91XB0 Gm44190-201ENSMUST00000205083 1401 ntBASIC13.33□□□□□ -0.28
Trex1Q91XB0 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms