Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 AC154849.3-201ENSMUST00000223733 1660 ntBASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Nectin4-203ENSMUST00000111286 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Stpg2-201ENSMUST00000062306 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Numb-210ENSMUST00000154043 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Cd1d1-201ENSMUST00000029717 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Gm37582-201ENSMUST00000192953 1409 ntBASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc9Q8VC31 Zfp352-202ENSMUST00000107129 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc9Q8VC31 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc9Q8VC31 Rpl18-207ENSMUST00000210640 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc9Q8VC31 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc9Q8VC31 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc9Q8VC31 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc9Q8VC31 Susd2-202ENSMUST00000095541 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc9Q8VC31 Acss3-203ENSMUST00000165067 4696 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc9Q8VC31 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc9Q8VC31 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc9Q8VC31 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc9Q8VC31 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc9Q8VC31 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc9Q8VC31 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc9Q8VC31 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc9Q8VC31 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ccdc9Q8VC31 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc9Q8VC31 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc9Q8VC31 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.04□□□□□ -0.16
Ccdc9Q8VC31 Mir6392-201ENSMUST00000184924 108 ntBASIC14.04□□□□□ -0.16
Ccdc9Q8VC31 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc9Q8VC31 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.04□□□□□ -0.16
Ccdc9Q8VC31 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc9Q8VC31 Gm45668-201ENSMUST00000211271 493 ntBASIC14.04□□□□□ -0.16
Ccdc9Q8VC31 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc9Q8VC31 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc9Q8VC31 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc9Q8VC31 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc9Q8VC31 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc9Q8VC31 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc9Q8VC31 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc9Q8VC31 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC14.04□□□□□ -0.16
Ccdc9Q8VC31 AC158777.1-201ENSMUST00000226216 1724 ntBASIC14.04□□□□□ -0.16
Ccdc9Q8VC31 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc9Q8VC31 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc9Q8VC31 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Ccdc9Q8VC31 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc9Q8VC31 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc9Q8VC31 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc9Q8VC31 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc9Q8VC31 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc9Q8VC31 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.03□□□□□ -0.16
Ccdc9Q8VC31 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc9Q8VC31 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Ccdc9Q8VC31 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.03□□□□□ -0.16
Ccdc9Q8VC31 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc9Q8VC31 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.03□□□□□ -0.16
Ccdc9Q8VC31 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc9Q8VC31 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc9Q8VC31 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc9Q8VC31 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.03□□□□□ -0.16
Ccdc9Q8VC31 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.03□□□□□ -0.16
Ccdc9Q8VC31 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.03□□□□□ -0.16
Ccdc9Q8VC31 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.03□□□□□ -0.16
Ccdc9Q8VC31 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc9Q8VC31 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc9Q8VC31 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc9Q8VC31 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc9Q8VC31 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc9Q8VC31 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms