Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CopaQ8CIE6 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.97□□□□□ -0.49
CopaQ8CIE6 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.97□□□□□ -0.49
CopaQ8CIE6 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Gm9062-201ENSMUST00000117712 727 ntBASIC11.97□□□□□ -0.49
CopaQ8CIE6 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.97□□□□□ -0.49
CopaQ8CIE6 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.97□□□□□ -0.49
CopaQ8CIE6 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.97□□□□□ -0.49
CopaQ8CIE6 Gm270-201ENSMUST00000223010 976 ntBASIC11.97□□□□□ -0.49
CopaQ8CIE6 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.97□□□□□ -0.49
CopaQ8CIE6 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CopaQ8CIE6 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.96□□□□□ -0.49
CopaQ8CIE6 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
CopaQ8CIE6 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CopaQ8CIE6 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
CopaQ8CIE6 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
CopaQ8CIE6 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CopaQ8CIE6 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
CopaQ8CIE6 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CopaQ8CIE6 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.96□□□□□ -0.49
CopaQ8CIE6 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.96□□□□□ -0.49
CopaQ8CIE6 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
CopaQ8CIE6 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CopaQ8CIE6 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.96□□□□□ -0.49
CopaQ8CIE6 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CopaQ8CIE6 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CopaQ8CIE6 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CopaQ8CIE6 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
CopaQ8CIE6 Gm13611-201ENSMUST00000118269 318 ntBASIC11.96□□□□□ -0.49
CopaQ8CIE6 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.96□□□□□ -0.49
CopaQ8CIE6 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.96□□□□□ -0.49
CopaQ8CIE6 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.96□□□□□ -0.49
CopaQ8CIE6 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
CopaQ8CIE6 Gm24514-201ENSMUST00000174961 285 ntBASIC11.96□□□□□ -0.49
CopaQ8CIE6 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.96□□□□□ -0.49
CopaQ8CIE6 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.96□□□□□ -0.49
CopaQ8CIE6 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.96□□□□□ -0.49
CopaQ8CIE6 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.96□□□□□ -0.49
CopaQ8CIE6 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.96□□□□□ -0.49
CopaQ8CIE6 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.96□□□□□ -0.49
CopaQ8CIE6 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CopaQ8CIE6 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
CopaQ8CIE6 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CopaQ8CIE6 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.96□□□□□ -0.49
CopaQ8CIE6 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CopaQ8CIE6 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.96□□□□□ -0.49
CopaQ8CIE6 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC11.96□□□□□ -0.49
CopaQ8CIE6 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.96□□□□□ -0.5
CopaQ8CIE6 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CopaQ8CIE6 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.96□□□□□ -0.5
CopaQ8CIE6 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
CopaQ8CIE6 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CopaQ8CIE6 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
CopaQ8CIE6 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
CopaQ8CIE6 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CopaQ8CIE6 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CopaQ8CIE6 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
CopaQ8CIE6 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.96□□□□□ -0.5
CopaQ8CIE6 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
CopaQ8CIE6 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms