Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 Gm28882-201ENSMUST00000185504 314 ntBASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28bQ8CEG5 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Gm16379-201ENSMUST00000161469 348 ntBASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Gm6114-201ENSMUST00000182472 968 ntBASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Gm8762-201ENSMUST00000193486 339 ntBASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Gm6439-201ENSMUST00000199849 862 ntBASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Gm5035-201ENSMUST00000215581 927 ntBASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28bQ8CEG5 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms