Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Gm45186-201ENSMUST00000206874 478 ntBASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vcpip1Q8CDG3 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vcpip1Q8CDG3 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vcpip1Q8CDG3 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vcpip1Q8CDG3 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Vcpip1Q8CDG3 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vcpip1Q8CDG3 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vcpip1Q8CDG3 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Vcpip1Q8CDG3 Gm11439-201ENSMUST00000118598 409 ntBASIC12.57□□□□□ -0.4
Vcpip1Q8CDG3 Gm4909-201ENSMUST00000118749 794 ntBASIC12.57□□□□□ -0.4
Vcpip1Q8CDG3 Gm14277-201ENSMUST00000121195 360 ntBASIC12.57□□□□□ -0.4
Vcpip1Q8CDG3 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.57□□□□□ -0.4
Vcpip1Q8CDG3 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vcpip1Q8CDG3 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vcpip1Q8CDG3 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vcpip1Q8CDG3 Mir5120-201ENSMUST00000175020 78 ntBASIC12.57□□□□□ -0.4
Vcpip1Q8CDG3 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Vcpip1Q8CDG3 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.57□□□□□ -0.4
Vcpip1Q8CDG3 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vcpip1Q8CDG3 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vcpip1Q8CDG3 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vcpip1Q8CDG3 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vcpip1Q8CDG3 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vcpip1Q8CDG3 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vcpip1Q8CDG3 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vcpip1Q8CDG3 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vcpip1Q8CDG3 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Vcpip1Q8CDG3 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vcpip1Q8CDG3 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.57□□□□□ -0.4
Vcpip1Q8CDG3 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vcpip1Q8CDG3 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vcpip1Q8CDG3 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.57□□□□□ -0.4
Vcpip1Q8CDG3 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vcpip1Q8CDG3 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vcpip1Q8CDG3 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Gm26286-201ENSMUST00000104166 134 ntBASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Gm19287-201ENSMUST00000203190 358 ntBASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Gm13097-201ENSMUST00000210722 397 ntBASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms