Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Alx1Q8C8B0 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Alx1Q8C8B0 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Gm23272-201ENSMUST00000104053 129 ntBASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Gm15615-201ENSMUST00000118876 198 ntBASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Gm15329-201ENSMUST00000121408 155 ntBASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Gm9550-201ENSMUST00000161130 862 ntBASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Gm5996-201ENSMUST00000211110 718 ntBASIC13.59□□□□□ -0.23
Alx1Q8C8B0 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 AC122350.1-201ENSMUST00000228135 533 ntBASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Gm5740-201ENSMUST00000211003 1857 ntBASIC13.59□□□□□ -0.23
Alx1Q8C8B0 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Alx1Q8C8B0 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Alx1Q8C8B0 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Alx1Q8C8B0 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC13.58□□□□□ -0.23
Alx1Q8C8B0 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Alx1Q8C8B0 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Alx1Q8C8B0 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Alx1Q8C8B0 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC13.58□□□□□ -0.24
Alx1Q8C8B0 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Alx1Q8C8B0 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Alx1Q8C8B0 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC13.58□□□□□ -0.24
Alx1Q8C8B0 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Alx1Q8C8B0 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC13.58□□□□□ -0.24
Alx1Q8C8B0 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Alx1Q8C8B0 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC13.58□□□□□ -0.24
Alx1Q8C8B0 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Alx1Q8C8B0 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13.58□□□□□ -0.24
Alx1Q8C8B0 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Alx1Q8C8B0 AC125486.1-201ENSMUST00000218701 320 ntBASIC13.58□□□□□ -0.24
Alx1Q8C8B0 AC171241.1-201ENSMUST00000228144 1166 ntBASIC13.58□□□□□ -0.24
Alx1Q8C8B0 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC13.58□□□□□ -0.24
Alx1Q8C8B0 Gm21358-201ENSMUST00000191645 1659 ntBASIC13.58□□□□□ -0.24
Alx1Q8C8B0 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Alx1Q8C8B0 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Alx1Q8C8B0 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Alx1Q8C8B0 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Alx1Q8C8B0 Gm37600-201ENSMUST00000193764 3292 ntBASIC13.58□□□□□ -0.24
Alx1Q8C8B0 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Alx1Q8C8B0 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Alx1Q8C8B0 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Alx1Q8C8B0 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC13.58□□□□□ -0.24
Alx1Q8C8B0 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC13.58□□□□□ -0.24
Alx1Q8C8B0 Rubie-203ENSMUST00000227803 2430 ntBASIC13.58□□□□□ -0.24
Alx1Q8C8B0 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Alx1Q8C8B0 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Alx1Q8C8B0 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Alx1Q8C8B0 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms