Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Gm12194-201ENSMUST00000117756 1012 ntBASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Gm12179-201ENSMUST00000118344 1272 ntBASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Gm43752-201ENSMUST00000198475 697 ntBASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Trav11n-201ENSMUST00000200113 343 ntBASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 AC238940.1-201ENSMUST00000225106 1858 ntBASIC10.55□□□□□ -0.72
Col6a6Q8C6K9 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Gm15374-201ENSMUST00000119313 844 ntBASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Gm22846-201ENSMUST00000157706 270 ntBASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 AC142266.1-201ENSMUST00000228107 415 ntBASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Gm10263-201ENSMUST00000085163 300 ntBASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Gm12712-201ENSMUST00000120676 801 ntBASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Gm26976-201ENSMUST00000182929 908 ntBASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 AC153962.2-201ENSMUST00000219417 550 ntBASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 AC154361.2-201ENSMUST00000224747 943 ntBASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Arhgef33-210ENSMUST00000225548 456 ntBASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Col6a6Q8C6K9 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Gm43334-201ENSMUST00000197740 1318 ntBASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.53□□□□□ -0.72
Col6a6Q8C6K9 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms