Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm12566-201ENSMUST00000121479 359 ntBASIC14.89□□□□□ -0.03
Ccdc60Q8C4J0 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC14.89□□□□□ -0.03
Ccdc60Q8C4J0 Gm6397-201ENSMUST00000161973 1069 ntBASIC14.89□□□□□ -0.03
Ccdc60Q8C4J0 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC14.89□□□□□ -0.03
Ccdc60Q8C4J0 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc60Q8C4J0 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc60Q8C4J0 Lect2-202ENSMUST00000225183 823 ntBASIC14.89□□□□□ -0.03
Ccdc60Q8C4J0 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc60Q8C4J0 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc60Q8C4J0 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ccdc60Q8C4J0 Gm7551-201ENSMUST00000089593 1074 ntBASIC14.89□□□□□ -0.03
Ccdc60Q8C4J0 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ccdc60Q8C4J0 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC14.89□□□□□ -0.03
Ccdc60Q8C4J0 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ccdc60Q8C4J0 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc60Q8C4J0 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc60Q8C4J0 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc60Q8C4J0 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc60Q8C4J0 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Ccdc60Q8C4J0 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc60Q8C4J0 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc60Q8C4J0 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc60Q8C4J0 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc60Q8C4J0 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc60Q8C4J0 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc60Q8C4J0 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc60Q8C4J0 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc60Q8C4J0 Erich3-203ENSMUST00000189969 3460 ntBASIC14.89□□□□□ -0.03
Ccdc60Q8C4J0 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc60Q8C4J0 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc60Q8C4J0 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc60Q8C4J0 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc60Q8C4J0 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc60Q8C4J0 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc60Q8C4J0 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc60Q8C4J0 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ccdc60Q8C4J0 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc60Q8C4J0 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc60Q8C4J0 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc60Q8C4J0 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.88□□□□□ -0.03
Ccdc60Q8C4J0 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Ccdc60Q8C4J0 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC14.88□□□□□ -0.03
Ccdc60Q8C4J0 Gm8459-201ENSMUST00000162504 760 ntBASIC14.88□□□□□ -0.03
Ccdc60Q8C4J0 Gm19353-201ENSMUST00000184561 445 ntBASIC14.88□□□□□ -0.03
Ccdc60Q8C4J0 Gm6905-201ENSMUST00000205729 511 ntBASIC14.88□□□□□ -0.03
Ccdc60Q8C4J0 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc60Q8C4J0 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc60Q8C4J0 Gm7207-201ENSMUST00000211575 1067 ntBASIC14.88□□□□□ -0.03
Ccdc60Q8C4J0 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc60Q8C4J0 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc60Q8C4J0 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Ccdc60Q8C4J0 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc60Q8C4J0 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc60Q8C4J0 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc60Q8C4J0 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc60Q8C4J0 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc60Q8C4J0 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc60Q8C4J0 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc60Q8C4J0 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc60Q8C4J0 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc60Q8C4J0 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc60Q8C4J0 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc60Q8C4J0 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc60Q8C4J0 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC14.87□□□□□ -0.03
Ccdc60Q8C4J0 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc60Q8C4J0 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc60Q8C4J0 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc60Q8C4J0 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc60Q8C4J0 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC14.87□□□□□ -0.03
Ccdc60Q8C4J0 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc60Q8C4J0 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC14.87□□□□□ -0.03
Ccdc60Q8C4J0 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc60Q8C4J0 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc60Q8C4J0 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Ccdc60Q8C4J0 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc60Q8C4J0 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc60Q8C4J0 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ccdc60Q8C4J0 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc60Q8C4J0 Gm12165-201ENSMUST00000117047 342 ntBASIC14.87□□□□□ -0.03
Ccdc60Q8C4J0 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc60Q8C4J0 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc60Q8C4J0 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc60Q8C4J0 Ginm1-202ENSMUST00000065124 300 ntBASIC14.87□□□□□ -0.03
Ccdc60Q8C4J0 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc60Q8C4J0 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc60Q8C4J0 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc60Q8C4J0 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc60Q8C4J0 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc60Q8C4J0 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ccdc60Q8C4J0 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc60Q8C4J0 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc60Q8C4J0 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc60Q8C4J0 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Ccdc60Q8C4J0 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc60Q8C4J0 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc60Q8C4J0 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc60Q8C4J0 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc60Q8C4J0 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC14.87□□□□□ -0.03
Ccdc60Q8C4J0 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Ccdc60Q8C4J0 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms