Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Gm37648-201ENSMUST00000192072 2563 ntBASIC10.47□□□□□ -0.73
Rft1Q8C3B8 AC121870.2-201ENSMUST00000214343 1870 ntBASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Gm37259-201ENSMUST00000193903 849 ntBASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Gm10076-201ENSMUST00000073238 384 ntBASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.46□□□□□ -0.73
Rft1Q8C3B8 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Rft1Q8C3B8 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rft1Q8C3B8 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rft1Q8C3B8 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rft1Q8C3B8 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Rft1Q8C3B8 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Rft1Q8C3B8 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Rft1Q8C3B8 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rft1Q8C3B8 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rft1Q8C3B8 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Rft1Q8C3B8 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Rft1Q8C3B8 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Rft1Q8C3B8 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Rft1Q8C3B8 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rft1Q8C3B8 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Rft1Q8C3B8 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rft1Q8C3B8 Gm25214-201ENSMUST00000104573 129 ntBASIC10.46□□□□□ -0.73
Rft1Q8C3B8 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rft1Q8C3B8 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.46□□□□□ -0.73
Rft1Q8C3B8 Gm14999-201ENSMUST00000121039 624 ntBASIC10.46□□□□□ -0.73
Rft1Q8C3B8 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Rft1Q8C3B8 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.46□□□□□ -0.73
Rft1Q8C3B8 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC10.46□□□□□ -0.73
Rft1Q8C3B8 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.46□□□□□ -0.73
Rft1Q8C3B8 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC10.46□□□□□ -0.73
Rft1Q8C3B8 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.46□□□□□ -0.73
Rft1Q8C3B8 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Rft1Q8C3B8 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
Rft1Q8C3B8 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.46□□□□□ -0.73
Rft1Q8C3B8 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rft1Q8C3B8 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.46□□□□□ -0.74
Rft1Q8C3B8 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rft1Q8C3B8 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rft1Q8C3B8 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rft1Q8C3B8 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Rft1Q8C3B8 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Rft1Q8C3B8 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rft1Q8C3B8 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms