Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Usp54Q8BL06 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp54Q8BL06 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp54Q8BL06 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp54Q8BL06 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp54Q8BL06 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC16.35■□□□□ 0.21
Usp54Q8BL06 Gm13135-201ENSMUST00000117628 3121 ntBASIC16.35■□□□□ 0.21
Usp54Q8BL06 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp54Q8BL06 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC16.35■□□□□ 0.21
Usp54Q8BL06 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp54Q8BL06 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp54Q8BL06 Gm33366-201ENSMUST00000195583 3827 ntBASIC16.35■□□□□ 0.21
Usp54Q8BL06 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Usp54Q8BL06 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp54Q8BL06 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp54Q8BL06 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp54Q8BL06 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Usp54Q8BL06 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp54Q8BL06 Snord17-201ENSMUST00000104526 238 ntBASIC16.34■□□□□ 0.21
Usp54Q8BL06 Gm14113-201ENSMUST00000121399 976 ntBASIC16.34■□□□□ 0.21
Usp54Q8BL06 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Usp54Q8BL06 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC16.34■□□□□ 0.21
Usp54Q8BL06 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC16.34■□□□□ 0.21
Usp54Q8BL06 Ighv5-8-202ENSMUST00000191967 337 ntBASIC16.34■□□□□ 0.21
Usp54Q8BL06 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Usp54Q8BL06 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp54Q8BL06 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp54Q8BL06 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Usp54Q8BL06 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp54Q8BL06 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC16.34■□□□□ 0.21
Usp54Q8BL06 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp54Q8BL06 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Usp54Q8BL06 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp54Q8BL06 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp54Q8BL06 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Usp54Q8BL06 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp54Q8BL06 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp54Q8BL06 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp54Q8BL06 Gm42499-201ENSMUST00000196193 1412 ntBASIC16.34■□□□□ 0.21
Usp54Q8BL06 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
Usp54Q8BL06 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp54Q8BL06 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp54Q8BL06 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp54Q8BL06 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp54Q8BL06 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp54Q8BL06 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC16.34■□□□□ 0.21
Usp54Q8BL06 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Usp54Q8BL06 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC16.34■□□□□ 0.21
Usp54Q8BL06 Gm43752-201ENSMUST00000198475 697 ntBASIC16.34■□□□□ 0.21
Usp54Q8BL06 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC16.34■□□□□ 0.21
Usp54Q8BL06 AC154435.1-201ENSMUST00000223938 959 ntBASIC16.34■□□□□ 0.21
Usp54Q8BL06 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp54Q8BL06 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Usp54Q8BL06 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp54Q8BL06 Gm6641-201ENSMUST00000196100 1315 ntBASIC16.34■□□□□ 0.21
Usp54Q8BL06 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Usp54Q8BL06 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Usp54Q8BL06 Gm14005-209ENSMUST00000224993 1832 ntBASIC16.33■□□□□ 0.21
Usp54Q8BL06 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Usp54Q8BL06 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Usp54Q8BL06 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Usp54Q8BL06 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp54Q8BL06 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp54Q8BL06 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Usp54Q8BL06 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Usp54Q8BL06 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp54Q8BL06 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Usp54Q8BL06 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp54Q8BL06 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC16.33■□□□□ 0.2
Usp54Q8BL06 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Usp54Q8BL06 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC16.33■□□□□ 0.2
Usp54Q8BL06 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Usp54Q8BL06 Gm43002-201ENSMUST00000200310 155 ntBASIC16.33■□□□□ 0.2
Usp54Q8BL06 Gm42867-201ENSMUST00000202995 469 ntBASIC16.33■□□□□ 0.2
Usp54Q8BL06 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC16.33■□□□□ 0.2
Usp54Q8BL06 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC16.33■□□□□ 0.2
Usp54Q8BL06 Gm44605-201ENSMUST00000206892 949 ntBASIC16.33■□□□□ 0.2
Usp54Q8BL06 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
Usp54Q8BL06 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC16.33■□□□□ 0.2
Usp54Q8BL06 Gm6564-201ENSMUST00000075377 619 ntBASIC16.33■□□□□ 0.2
Usp54Q8BL06 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp54Q8BL06 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Usp54Q8BL06 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Usp54Q8BL06 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.33■□□□□ 0.2
Usp54Q8BL06 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC16.33■□□□□ 0.2
Usp54Q8BL06 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC16.33■□□□□ 0.2
Usp54Q8BL06 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp54Q8BL06 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp54Q8BL06 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp54Q8BL06 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp54Q8BL06 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp54Q8BL06 Gm43365-201ENSMUST00000196522 2106 ntBASIC16.32■□□□□ 0.2
Usp54Q8BL06 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Usp54Q8BL06 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Usp54Q8BL06 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Usp54Q8BL06 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Usp54Q8BL06 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp54Q8BL06 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Usp54Q8BL06 AC022682.1-201ENSMUST00000224624 2023 ntBASIC16.32■□□□□ 0.2
Usp54Q8BL06 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms