Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Gm6407-201ENSMUST00000176468 549 ntBASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Mir6407-201ENSMUST00000184510 101 ntBASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Gm42599-201ENSMUST00000201308 469 ntBASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Gm8436-201ENSMUST00000210152 1080 ntBASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Gm5749-201ENSMUST00000210673 1090 ntBASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Gm45758-201ENSMUST00000212448 1006 ntBASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 AC174797.2-202ENSMUST00000225729 568 ntBASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcal1Q8BJL0 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 Gm4294-201ENSMUST00000105169 614 ntBASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 Gm12247-201ENSMUST00000117585 670 ntBASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 Gm13600-201ENSMUST00000117949 744 ntBASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 Gm11422-201ENSMUST00000118925 1103 ntBASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 Gm10169-201ENSMUST00000121822 348 ntBASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 Gm25517-201ENSMUST00000083865 134 ntBASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.47□□□□□ -0.41
Smarcal1Q8BJL0 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms