Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nod1Q8BHB0 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Nod1Q8BHB0 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nod1Q8BHB0 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.3□□□□□ -0.44
Nod1Q8BHB0 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nod1Q8BHB0 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nod1Q8BHB0 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Nod1Q8BHB0 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nod1Q8BHB0 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nod1Q8BHB0 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nod1Q8BHB0 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Nod1Q8BHB0 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nod1Q8BHB0 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.3□□□□□ -0.44
Nod1Q8BHB0 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nod1Q8BHB0 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nod1Q8BHB0 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nod1Q8BHB0 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.3□□□□□ -0.44
Nod1Q8BHB0 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nod1Q8BHB0 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC12.3□□□□□ -0.44
Nod1Q8BHB0 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nod1Q8BHB0 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nod1Q8BHB0 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nod1Q8BHB0 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nod1Q8BHB0 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nod1Q8BHB0 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nod1Q8BHB0 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nod1Q8BHB0 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Gm25951-201ENSMUST00000175330 64 ntBASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Gm29410-201ENSMUST00000188383 694 ntBASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Gm5100-201ENSMUST00000195631 589 ntBASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nod1Q8BHB0 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Nod1Q8BHB0 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nod1Q8BHB0 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nod1Q8BHB0 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nod1Q8BHB0 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nod1Q8BHB0 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nod1Q8BHB0 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nod1Q8BHB0 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nod1Q8BHB0 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nod1Q8BHB0 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nod1Q8BHB0 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nod1Q8BHB0 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nod1Q8BHB0 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.28□□□□□ -0.44
Nod1Q8BHB0 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nod1Q8BHB0 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nod1Q8BHB0 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nod1Q8BHB0 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nod1Q8BHB0 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Nod1Q8BHB0 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Nod1Q8BHB0 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.28□□□□□ -0.44
Nod1Q8BHB0 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.28□□□□□ -0.44
Nod1Q8BHB0 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.28□□□□□ -0.44
Nod1Q8BHB0 Gm12036-201ENSMUST00000120008 530 ntBASIC12.28□□□□□ -0.44
Nod1Q8BHB0 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nod1Q8BHB0 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.28□□□□□ -0.44
Nod1Q8BHB0 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nod1Q8BHB0 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nod1Q8BHB0 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nod1Q8BHB0 Gm6114-201ENSMUST00000182472 968 ntBASIC12.28□□□□□ -0.44
Nod1Q8BHB0 Gm9192-201ENSMUST00000183221 985 ntBASIC12.28□□□□□ -0.44
Nod1Q8BHB0 Mir6407-201ENSMUST00000184510 101 ntBASIC12.28□□□□□ -0.44
Nod1Q8BHB0 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nod1Q8BHB0 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.28□□□□□ -0.44
Nod1Q8BHB0 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC12.28□□□□□ -0.44
Nod1Q8BHB0 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms