Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Ush1gQ80T11 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.82□□□□□ -0.36
Ush1gQ80T11 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.82□□□□□ -0.36
Ush1gQ80T11 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ush1gQ80T11 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ush1gQ80T11 Gm6771-201ENSMUST00000182716 1001 ntBASIC12.82□□□□□ -0.36
Ush1gQ80T11 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ush1gQ80T11 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.82□□□□□ -0.36
Ush1gQ80T11 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.82□□□□□ -0.36
Ush1gQ80T11 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ush1gQ80T11 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.82□□□□□ -0.36
Ush1gQ80T11 n-R5s211-201ENSMUST00000093689 119 ntBASIC12.82□□□□□ -0.36
Ush1gQ80T11 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ush1gQ80T11 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ush1gQ80T11 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ush1gQ80T11 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ush1gQ80T11 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ush1gQ80T11 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ush1gQ80T11 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ush1gQ80T11 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ush1gQ80T11 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ush1gQ80T11 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ush1gQ80T11 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ush1gQ80T11 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.82□□□□□ -0.36
Ush1gQ80T11 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ush1gQ80T11 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.81□□□□□ -0.36
Ush1gQ80T11 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.81□□□□□ -0.36
Ush1gQ80T11 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ush1gQ80T11 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.81□□□□□ -0.36
Ush1gQ80T11 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ush1gQ80T11 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Ush1gQ80T11 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ush1gQ80T11 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ush1gQ80T11 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ush1gQ80T11 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Ush1gQ80T11 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ush1gQ80T11 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ush1gQ80T11 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ush1gQ80T11 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ush1gQ80T11 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.81□□□□□ -0.36
Ush1gQ80T11 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.81□□□□□ -0.36
Ush1gQ80T11 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ush1gQ80T11 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.81□□□□□ -0.36
Ush1gQ80T11 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ush1gQ80T11 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Ush1gQ80T11 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ush1gQ80T11 Gm12579-201ENSMUST00000118040 783 ntBASIC12.81□□□□□ -0.36
Ush1gQ80T11 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ush1gQ80T11 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.81□□□□□ -0.36
Ush1gQ80T11 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ush1gQ80T11 Mir1956-201ENSMUST00000157748 65 ntBASIC12.81□□□□□ -0.36
Ush1gQ80T11 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ush1gQ80T11 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.81□□□□□ -0.36
Ush1gQ80T11 Gm44329-201ENSMUST00000197469 112 ntBASIC12.81□□□□□ -0.36
Ush1gQ80T11 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC12.81□□□□□ -0.36
Ush1gQ80T11 Gm44506-201ENSMUST00000206278 965 ntBASIC12.81□□□□□ -0.36
Ush1gQ80T11 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.81□□□□□ -0.36
Ush1gQ80T11 Gm19009-201ENSMUST00000223072 823 ntBASIC12.81□□□□□ -0.36
Ush1gQ80T11 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.81□□□□□ -0.36
Ush1gQ80T11 AC154184.3-201ENSMUST00000225620 1090 ntBASIC12.81□□□□□ -0.36
Ush1gQ80T11 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ush1gQ80T11 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ush1gQ80T11 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC12.81□□□□□ -0.36
Ush1gQ80T11 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.81□□□□□ -0.36
Ush1gQ80T11 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Ush1gQ80T11 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ush1gQ80T11 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ush1gQ80T11 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ush1gQ80T11 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ush1gQ80T11 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ush1gQ80T11 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Ush1gQ80T11 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.81□□□□□ -0.36
Ush1gQ80T11 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ush1gQ80T11 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.81□□□□□ -0.36
Ush1gQ80T11 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ush1gQ80T11 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ush1gQ80T11 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ush1gQ80T11 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ush1gQ80T11 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ush1gQ80T11 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ush1gQ80T11 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ush1gQ80T11 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ush1gQ80T11 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ush1gQ80T11 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ush1gQ80T11 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ush1gQ80T11 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ush1gQ80T11 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ush1gQ80T11 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ush1gQ80T11 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ush1gQ80T11 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ush1gQ80T11 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ush1gQ80T11 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ush1gQ80T11 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ush1gQ80T11 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.8□□□□□ -0.36
Ush1gQ80T11 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ush1gQ80T11 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ush1gQ80T11 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ush1gQ80T11 Gm14219-201ENSMUST00000120414 288 ntBASIC12.8□□□□□ -0.36
Ush1gQ80T11 Gm11836-201ENSMUST00000121022 441 ntBASIC12.8□□□□□ -0.36
Ush1gQ80T11 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms