Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col12a1Q60847 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col12a1Q60847 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col12a1Q60847 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col12a1Q60847 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Col12a1Q60847 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col12a1Q60847 H2afy3-201ENSMUST00000151919 1112 ntBASIC11.22□□□□□ -0.61
Col12a1Q60847 Gm6114-201ENSMUST00000182472 968 ntBASIC11.22□□□□□ -0.61
Col12a1Q60847 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col12a1Q60847 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC11.22□□□□□ -0.61
Col12a1Q60847 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col12a1Q60847 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.22□□□□□ -0.61
Col12a1Q60847 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col12a1Q60847 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col12a1Q60847 Gm12745-201ENSMUST00000121767 214 ntBASIC11.22□□□□□ -0.61
Col12a1Q60847 Gm21631-201ENSMUST00000195041 754 ntBASIC11.22□□□□□ -0.61
Col12a1Q60847 AC159006.3-201ENSMUST00000226918 664 ntBASIC11.22□□□□□ -0.61
Col12a1Q60847 Olfr761-201ENSMUST00000049620 1029 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Col12a1Q60847 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col12a1Q60847 Olfr127-201ENSMUST00000076331 1095 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Col12a1Q60847 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Col12a1Q60847 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col12a1Q60847 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col12a1Q60847 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Col12a1Q60847 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Col12a1Q60847 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col12a1Q60847 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col12a1Q60847 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col12a1Q60847 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col12a1Q60847 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Col12a1Q60847 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col12a1Q60847 Hat1-201ENSMUST00000028408 1576 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col12a1Q60847 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col12a1Q60847 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col12a1Q60847 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.22□□□□□ -0.61
Col12a1Q60847 Pvalb-202ENSMUST00000120592 953 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col12a1Q60847 Gm14524-201ENSMUST00000121066 683 ntBASIC11.22□□□□□ -0.61
Col12a1Q60847 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col12a1Q60847 Sparc-208ENSMUST00000214685 1269 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Col12a1Q60847 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Col12a1Q60847 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Col12a1Q60847 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.22□□□□□ -0.61
Col12a1Q60847 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Col12a1Q60847 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col12a1Q60847 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col12a1Q60847 Gm5159-201ENSMUST00000212733 1652 ntBASIC11.21□□□□□ -0.61
Col12a1Q60847 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.21□□□□□ -0.61
Col12a1Q60847 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col12a1Q60847 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Col12a1Q60847 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col12a1Q60847 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col12a1Q60847 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Col12a1Q60847 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Col12a1Q60847 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.21□□□□□ -0.61
Col12a1Q60847 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col12a1Q60847 Gm23129-201ENSMUST00000104259 132 ntBASIC11.21□□□□□ -0.61
Col12a1Q60847 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Col12a1Q60847 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.21□□□□□ -0.61
Col12a1Q60847 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col12a1Q60847 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col12a1Q60847 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.21□□□□□ -0.61
Col12a1Q60847 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.21□□□□□ -0.61
Col12a1Q60847 Gm45745-201ENSMUST00000211447 1180 ntBASIC11.21□□□□□ -0.61
Col12a1Q60847 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col12a1Q60847 Gm7589-201ENSMUST00000085631 534 ntBASIC11.21□□□□□ -0.61
Col12a1Q60847 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.21□□□□□ -0.61
Col12a1Q60847 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Col12a1Q60847 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
Col12a1Q60847 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col12a1Q60847 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Col12a1Q60847 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.21□□□□□ -0.61
Col12a1Q60847 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.21□□□□□ -0.61
Col12a1Q60847 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC11.21□□□□□ -0.61
Col12a1Q60847 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col12a1Q60847 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col12a1Q60847 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col12a1Q60847 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Col12a1Q60847 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col12a1Q60847 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Col12a1Q60847 Gemin7-205ENSMUST00000122127 652 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.62
Col12a1Q60847 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Col12a1Q60847 Gm4960-201ENSMUST00000182928 1001 ntBASIC11.21□□□□□ -0.62
Col12a1Q60847 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Col12a1Q60847 Gm29328-212ENSMUST00000209182 1168 ntTSL 5 BASIC11.21□□□□□ -0.62
Col12a1Q60847 Gm45258-201ENSMUST00000210042 853 ntBASIC11.21□□□□□ -0.62
Col12a1Q60847 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col12a1Q60847 Cbx3-ps5-201ENSMUST00000091545 544 ntBASIC11.21□□□□□ -0.62
Col12a1Q60847 Cbx3-ps2-201ENSMUST00000099421 544 ntBASIC11.21□□□□□ -0.62
Col12a1Q60847 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col12a1Q60847 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Col12a1Q60847 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col12a1Q60847 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col12a1Q60847 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col12a1Q60847 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col12a1Q60847 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Col12a1Q60847 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col12a1Q60847 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col12a1Q60847 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col12a1Q60847 2810403D21Rik-204ENSMUST00000144421 747 ntTSL 3 BASIC11.2□□□□□ -0.62
Col12a1Q60847 Gm27149-201ENSMUST00000184716 1266 ntBASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 92.2 ms