Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rc3h1Q4VGL6 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Rc3h1Q4VGL6 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Rc3h1Q4VGL6 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Rc3h1Q4VGL6 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rc3h1Q4VGL6 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rc3h1Q4VGL6 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rc3h1Q4VGL6 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Rc3h1Q4VGL6 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Rc3h1Q4VGL6 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rc3h1Q4VGL6 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rc3h1Q4VGL6 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 Gm27438-201ENSMUST00000183480 110 ntBASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 Gm43037-201ENSMUST00000196808 250 ntBASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 CT485607.1-201ENSMUST00000216100 85 ntBASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 Gm10752-201ENSMUST00000218348 729 ntBASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 AC115122.1-201ENSMUST00000224850 1040 ntBASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rc3h1Q4VGL6 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rc3h1Q4VGL6 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rc3h1Q4VGL6 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC13.53□□□□□ -0.24
Rc3h1Q4VGL6 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rc3h1Q4VGL6 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Rc3h1Q4VGL6 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rc3h1Q4VGL6 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rc3h1Q4VGL6 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rc3h1Q4VGL6 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rc3h1Q4VGL6 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Rc3h1Q4VGL6 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC13.53□□□□□ -0.24
Rc3h1Q4VGL6 Gm12899-201ENSMUST00000120565 551 ntBASIC13.53□□□□□ -0.24
Rc3h1Q4VGL6 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Rc3h1Q4VGL6 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rc3h1Q4VGL6 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rc3h1Q4VGL6 Gm20495-201ENSMUST00000173902 235 ntBASIC13.53□□□□□ -0.24
Rc3h1Q4VGL6 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rc3h1Q4VGL6 Mir7076-201ENSMUST00000183519 74 ntBASIC13.53□□□□□ -0.24
Rc3h1Q4VGL6 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Rc3h1Q4VGL6 Gm28388-201ENSMUST00000186262 437 ntBASIC13.53□□□□□ -0.24
Rc3h1Q4VGL6 Gm37981-201ENSMUST00000194280 535 ntBASIC13.53□□□□□ -0.24
Rc3h1Q4VGL6 Hesx1-201ENSMUST00000035433 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rc3h1Q4VGL6 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Rc3h1Q4VGL6 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rc3h1Q4VGL6 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rc3h1Q4VGL6 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rc3h1Q4VGL6 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Rc3h1Q4VGL6 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Rc3h1Q4VGL6 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rc3h1Q4VGL6 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC13.52□□□□□ -0.24
Rc3h1Q4VGL6 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Rc3h1Q4VGL6 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rc3h1Q4VGL6 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rc3h1Q4VGL6 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rc3h1Q4VGL6 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.52□□□□□ -0.24
Rc3h1Q4VGL6 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rc3h1Q4VGL6 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rc3h1Q4VGL6 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rc3h1Q4VGL6 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rc3h1Q4VGL6 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rc3h1Q4VGL6 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Rc3h1Q4VGL6 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.24
Rc3h1Q4VGL6 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rc3h1Q4VGL6 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rc3h1Q4VGL6 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rc3h1Q4VGL6 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rc3h1Q4VGL6 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC13.52□□□□□ -0.25
Rc3h1Q4VGL6 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms