Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Gm12247-201ENSMUST00000117585 670 ntBASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Gm5335-201ENSMUST00000182995 1000 ntBASIC11.79□□□□□ -0.52
Fam196aQ3USH1 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Gm8197-202ENSMUST00000193422 934 ntBASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Gm7238-201ENSMUST00000206467 973 ntBASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Gm45310-201ENSMUST00000210436 275 ntBASIC11.79□□□□□ -0.52
Fam196aQ3USH1 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Fam196aQ3USH1 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Gm14497-201ENSMUST00000119537 580 ntBASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Gm11993-201ENSMUST00000121861 820 ntBASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Gm17221-201ENSMUST00000163909 481 ntBASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Gm17073-201ENSMUST00000168069 556 ntBASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Gm4034-201ENSMUST00000187674 480 ntBASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Gm7192-201ENSMUST00000210793 1137 ntBASIC11.78□□□□□ -0.52
Fam196aQ3USH1 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Fam196aQ3USH1 CT025689.1-201ENSMUST00000225214 283 ntBASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.78□□□□□ -0.52
Fam196aQ3USH1 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Fam196aQ3USH1 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.77□□□□□ -0.52
Fam196aQ3USH1 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Fam196aQ3USH1 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.77□□□□□ -0.52
Fam196aQ3USH1 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Fam196aQ3USH1 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Fam196aQ3USH1 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Fam196aQ3USH1 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.77□□□□□ -0.52
Fam196aQ3USH1 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Fam196aQ3USH1 Smok4a-201ENSMUST00000074512 1455 ntBASIC11.77□□□□□ -0.52
Fam196aQ3USH1 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Fam196aQ3USH1 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Fam196aQ3USH1 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.77□□□□□ -0.53
Fam196aQ3USH1 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Fam196aQ3USH1 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Fam196aQ3USH1 Gm6158-201ENSMUST00000109467 904 ntBASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms