Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Gm5996-201ENSMUST00000211110 718 ntBASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Gm4811-201ENSMUST00000220879 1220 ntBASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 AC154176.1-201ENSMUST00000225897 220 ntBASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Gm25201-201ENSMUST00000083093 170 ntBASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Mir483-201ENSMUST00000093631 73 ntBASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Gm14807-201ENSMUST00000116640 983 ntBASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Gm15549-201ENSMUST00000121595 622 ntBASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Gm35713-201ENSMUST00000210516 199 ntBASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Gm5468-202ENSMUST00000227851 682 ntBASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Gm16380-201ENSMUST00000077997 478 ntBASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upf3aQ3ULJ3 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.28□□□□□ -0.44
Upf3aQ3ULJ3 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upf3aQ3ULJ3 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.28□□□□□ -0.44
Upf3aQ3ULJ3 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Upf3aQ3ULJ3 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.28□□□□□ -0.44
Upf3aQ3ULJ3 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upf3aQ3ULJ3 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upf3aQ3ULJ3 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upf3aQ3ULJ3 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Upf3aQ3ULJ3 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upf3aQ3ULJ3 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upf3aQ3ULJ3 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upf3aQ3ULJ3 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Upf3aQ3ULJ3 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upf3aQ3ULJ3 Gm12274-201ENSMUST00000120062 385 ntBASIC12.28□□□□□ -0.44
Upf3aQ3ULJ3 Gm16219-201ENSMUST00000120096 274 ntBASIC12.28□□□□□ -0.44
Upf3aQ3ULJ3 Gm13022-201ENSMUST00000121181 285 ntBASIC12.28□□□□□ -0.44
Upf3aQ3ULJ3 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.28□□□□□ -0.44
Upf3aQ3ULJ3 Gm25492-201ENSMUST00000157383 129 ntBASIC12.28□□□□□ -0.44
Upf3aQ3ULJ3 Gm27390-201ENSMUST00000184516 176 ntBASIC12.28□□□□□ -0.44
Upf3aQ3ULJ3 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Upf3aQ3ULJ3 Gm43380-201ENSMUST00000200421 220 ntBASIC12.28□□□□□ -0.44
Upf3aQ3ULJ3 Gm9111-201ENSMUST00000219394 709 ntBASIC12.28□□□□□ -0.44
Upf3aQ3ULJ3 CT009527.1-201ENSMUST00000224205 339 ntBASIC12.28□□□□□ -0.44
Upf3aQ3ULJ3 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upf3aQ3ULJ3 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upf3aQ3ULJ3 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upf3aQ3ULJ3 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms