Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Gm11930-201ENSMUST00000117788 190 ntBASIC9.73□□□□□ -0.85
Tff1Q08423 Gm12616-201ENSMUST00000118594 382 ntBASIC9.73□□□□□ -0.85
Tff1Q08423 Gm14208-201ENSMUST00000119645 678 ntBASIC9.73□□□□□ -0.85
Tff1Q08423 Gm14832-201ENSMUST00000121289 322 ntBASIC9.73□□□□□ -0.85
Tff1Q08423 Gm15547-201ENSMUST00000122152 333 ntBASIC9.73□□□□□ -0.85
Tff1Q08423 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tff1Q08423 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Tff1Q08423 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Tff1Q08423 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC9.73□□□□□ -0.85
Tff1Q08423 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tff1Q08423 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tff1Q08423 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Tff1Q08423 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC9.73□□□□□ -0.85
Tff1Q08423 Gm12624-201ENSMUST00000177615 382 ntBASIC9.73□□□□□ -0.85
Tff1Q08423 Gm12621-201ENSMUST00000177760 382 ntBASIC9.73□□□□□ -0.85
Tff1Q08423 Gm12615-201ENSMUST00000177970 382 ntBASIC9.73□□□□□ -0.85
Tff1Q08423 Gm12622-201ENSMUST00000177975 382 ntBASIC9.73□□□□□ -0.85
Tff1Q08423 Gm12627-201ENSMUST00000178412 382 ntBASIC9.73□□□□□ -0.85
Tff1Q08423 Gm12625-201ENSMUST00000179122 382 ntBASIC9.73□□□□□ -0.85
Tff1Q08423 Gm12614-201ENSMUST00000179586 382 ntBASIC9.73□□□□□ -0.85
Tff1Q08423 Gm12613-201ENSMUST00000180323 382 ntBASIC9.73□□□□□ -0.85
Tff1Q08423 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tff1Q08423 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tff1Q08423 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC9.73□□□□□ -0.85
Tff1Q08423 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC9.73□□□□□ -0.85
Tff1Q08423 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC9.73□□□□□ -0.85
Tff1Q08423 AC113031.8-201ENSMUST00000227856 631 ntBASIC9.73□□□□□ -0.85
Tff1Q08423 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tff1Q08423 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tff1Q08423 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tff1Q08423 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tff1Q08423 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC9.73□□□□□ -0.85
Tff1Q08423 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC9.73□□□□□ -0.85
Tff1Q08423 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tff1Q08423 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC9.73□□□□□ -0.85
Tff1Q08423 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tff1Q08423 Gm9796-201ENSMUST00000062249 2250 ntBASIC9.73□□□□□ -0.85
Tff1Q08423 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tff1Q08423 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tff1Q08423 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tff1Q08423 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Tff1Q08423 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tff1Q08423 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
Tff1Q08423 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC9.73□□□□□ -0.85
Tff1Q08423 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Tff1Q08423 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tff1Q08423 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tff1Q08423 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tff1Q08423 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tff1Q08423 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tff1Q08423 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tff1Q08423 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC9.73□□□□□ -0.85
Tff1Q08423 Gm43773-201ENSMUST00000198548 2162 ntBASIC9.73□□□□□ -0.85
Tff1Q08423 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Tff1Q08423 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tff1Q08423 Gm2128-201ENSMUST00000108009 2560 ntBASIC9.72□□□□□ -0.85
Tff1Q08423 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Tff1Q08423 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tff1Q08423 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tff1Q08423 Gm43760-201ENSMUST00000202120 3015 ntBASIC9.72□□□□□ -0.85
Tff1Q08423 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tff1Q08423 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tff1Q08423 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Tff1Q08423 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC9.72□□□□□ -0.85
Tff1Q08423 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Tff1Q08423 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tff1Q08423 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC9.72□□□□□ -0.85
Tff1Q08423 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC9.72□□□□□ -0.85
Tff1Q08423 AC154671.1-201ENSMUST00000228617 1578 ntBASIC9.72□□□□□ -0.85
Tff1Q08423 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tff1Q08423 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Tff1Q08423 AC167669.2-201ENSMUST00000224417 1620 ntBASIC9.72□□□□□ -0.85
Tff1Q08423 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tff1Q08423 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Tff1Q08423 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Tff1Q08423 Gm25214-201ENSMUST00000104573 129 ntBASIC9.72□□□□□ -0.85
Tff1Q08423 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC9.72□□□□□ -0.85
Tff1Q08423 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Tff1Q08423 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC9.72□□□□□ -0.85
Tff1Q08423 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tff1Q08423 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Tff1Q08423 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tff1Q08423 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Tff1Q08423 Gm44262-201ENSMUST00000204969 372 ntBASIC9.72□□□□□ -0.85
Tff1Q08423 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC9.72□□□□□ -0.85
Tff1Q08423 CT009718.3-201ENSMUST00000221116 367 ntBASIC9.72□□□□□ -0.85
Tff1Q08423 AC161537.1-201ENSMUST00000226199 1015 ntBASIC9.72□□□□□ -0.85
Tff1Q08423 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tff1Q08423 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC9.72□□□□□ -0.85
Tff1Q08423 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Tff1Q08423 Gm9996-201ENSMUST00000070359 913 ntBASIC9.72□□□□□ -0.85
Tff1Q08423 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC9.72□□□□□ -0.85
Tff1Q08423 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Tff1Q08423 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tff1Q08423 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Tff1Q08423 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Tff1Q08423 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC9.72□□□□□ -0.85
Tff1Q08423 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC9.72□□□□□ -0.85
Tff1Q08423 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tff1Q08423 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms