Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Cntn3Q07409 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cntn3Q07409 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cntn3Q07409 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cntn3Q07409 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cntn3Q07409 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cntn3Q07409 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
Cntn3Q07409 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.28□□□□□ -0.44
Cntn3Q07409 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cntn3Q07409 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cntn3Q07409 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cntn3Q07409 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cntn3Q07409 Gm15131-201ENSMUST00000119124 595 ntBASIC12.28□□□□□ -0.44
Cntn3Q07409 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.28□□□□□ -0.44
Cntn3Q07409 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.28□□□□□ -0.44
Cntn3Q07409 Gm22144-201ENSMUST00000157402 102 ntBASIC12.28□□□□□ -0.44
Cntn3Q07409 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cntn3Q07409 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Cntn3Q07409 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cntn3Q07409 Gm29499-201ENSMUST00000189151 486 ntBASIC12.28□□□□□ -0.44
Cntn3Q07409 Gm28329-201ENSMUST00000191208 689 ntBASIC12.28□□□□□ -0.44
Cntn3Q07409 Gm29171-201ENSMUST00000191397 486 ntBASIC12.28□□□□□ -0.44
Cntn3Q07409 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cntn3Q07409 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.28□□□□□ -0.44
Cntn3Q07409 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC12.28□□□□□ -0.44
Cntn3Q07409 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.28□□□□□ -0.44
Cntn3Q07409 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cntn3Q07409 Gm29787-201ENSMUST00000222129 849 ntBASIC12.28□□□□□ -0.44
Cntn3Q07409 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cntn3Q07409 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cntn3Q07409 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cntn3Q07409 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.28□□□□□ -0.44
Cntn3Q07409 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cntn3Q07409 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cntn3Q07409 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cntn3Q07409 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cntn3Q07409 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cntn3Q07409 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cntn3Q07409 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cntn3Q07409 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cntn3Q07409 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cntn3Q07409 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cntn3Q07409 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cntn3Q07409 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cntn3Q07409 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cntn3Q07409 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.27□□□□□ -0.44
Cntn3Q07409 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cntn3Q07409 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cntn3Q07409 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cntn3Q07409 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cntn3Q07409 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cntn3Q07409 Gm8731-201ENSMUST00000118088 412 ntBASIC12.27□□□□□ -0.45
Cntn3Q07409 Gm7666-201ENSMUST00000146631 819 ntBASIC12.27□□□□□ -0.45
Cntn3Q07409 Gm15881-201ENSMUST00000148792 942 ntBASIC12.27□□□□□ -0.45
Cntn3Q07409 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Cntn3Q07409 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.27□□□□□ -0.45
Cntn3Q07409 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.27□□□□□ -0.45
Cntn3Q07409 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Cntn3Q07409 Gm19459-201ENSMUST00000176240 835 ntBASIC12.27□□□□□ -0.45
Cntn3Q07409 Gm5051-201ENSMUST00000204085 485 ntBASIC12.27□□□□□ -0.45
Cntn3Q07409 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.27□□□□□ -0.45
Cntn3Q07409 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Cntn3Q07409 Gm32390-201ENSMUST00000212713 1172 ntBASIC12.27□□□□□ -0.45
Cntn3Q07409 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.27□□□□□ -0.45
Cntn3Q07409 Gm6991-201ENSMUST00000218475 1178 ntBASIC12.27□□□□□ -0.45
Cntn3Q07409 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.27□□□□□ -0.45
Cntn3Q07409 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cntn3Q07409 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Cntn3Q07409 Gm10179-201ENSMUST00000086233 688 ntBASIC12.27□□□□□ -0.45
Cntn3Q07409 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cntn3Q07409 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cntn3Q07409 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cntn3Q07409 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.27□□□□□ -0.45
Cntn3Q07409 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cntn3Q07409 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Cntn3Q07409 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cntn3Q07409 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cntn3Q07409 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cntn3Q07409 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cntn3Q07409 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cntn3Q07409 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cntn3Q07409 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cntn3Q07409 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cntn3Q07409 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cntn3Q07409 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cntn3Q07409 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Cntn3Q07409 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Cntn3Q07409 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cntn3Q07409 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Cntn3Q07409 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn3Q07409 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn3Q07409 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cntn3Q07409 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn3Q07409 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn3Q07409 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn3Q07409 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn3Q07409 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.26□□□□□ -0.45
Cntn3Q07409 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn3Q07409 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn3Q07409 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms