Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Scn1bP97952 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Scn1bP97952 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scn1bP97952 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scn1bP97952 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC10.67□□□□□ -0.7
Scn1bP97952 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Scn1bP97952 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scn1bP97952 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scn1bP97952 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Scn1bP97952 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scn1bP97952 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Scn1bP97952 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scn1bP97952 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scn1bP97952 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC10.67□□□□□ -0.7
Scn1bP97952 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Scn1bP97952 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scn1bP97952 Gm24830-201ENSMUST00000102024 166 ntBASIC10.67□□□□□ -0.7
Scn1bP97952 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Scn1bP97952 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Scn1bP97952 Mup-ps23-201ENSMUST00000118063 630 ntBASIC10.67□□□□□ -0.7
Scn1bP97952 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.67□□□□□ -0.7
Scn1bP97952 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Scn1bP97952 Gm24644-201ENSMUST00000157114 139 ntBASIC10.67□□□□□ -0.7
Scn1bP97952 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Scn1bP97952 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Scn1bP97952 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Scn1bP97952 Gm27331-201ENSMUST00000183705 60 ntBASIC10.67□□□□□ -0.7
Scn1bP97952 Gm29649-201ENSMUST00000185649 419 ntBASIC10.67□□□□□ -0.7
Scn1bP97952 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.67□□□□□ -0.7
Scn1bP97952 Gm7653-201ENSMUST00000214567 508 ntBASIC10.67□□□□□ -0.7
Scn1bP97952 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scn1bP97952 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC10.67□□□□□ -0.7
Scn1bP97952 Gm26232-201ENSMUST00000083360 166 ntBASIC10.67□□□□□ -0.7
Scn1bP97952 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.67□□□□□ -0.7
Scn1bP97952 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scn1bP97952 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scn1bP97952 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scn1bP97952 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scn1bP97952 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Scn1bP97952 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Scn1bP97952 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Scn1bP97952 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.67□□□□□ -0.7
Scn1bP97952 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scn1bP97952 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Scn1bP97952 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scn1bP97952 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Scn1bP97952 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Scn1bP97952 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Scn1bP97952 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Scn1bP97952 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scn1bP97952 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scn1bP97952 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Scn1bP97952 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scn1bP97952 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC10.66□□□□□ -0.7
Scn1bP97952 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.66□□□□□ -0.7
Scn1bP97952 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scn1bP97952 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.66□□□□□ -0.7
Scn1bP97952 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Scn1bP97952 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Scn1bP97952 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Scn1bP97952 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scn1bP97952 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Scn1bP97952 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scn1bP97952 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Scn1bP97952 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.66□□□□□ -0.7
Scn1bP97952 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.66□□□□□ -0.7
Scn1bP97952 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Scn1bP97952 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Scn1bP97952 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Scn1bP97952 Gm11637-201ENSMUST00000120601 592 ntBASIC10.66□□□□□ -0.7
Scn1bP97952 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC10.66□□□□□ -0.7
Scn1bP97952 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC10.66□□□□□ -0.7
Scn1bP97952 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Scn1bP97952 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC10.66□□□□□ -0.7
Scn1bP97952 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scn1bP97952 Gm18304-201ENSMUST00000189162 546 ntBASIC10.66□□□□□ -0.7
Scn1bP97952 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC10.66□□□□□ -0.7
Scn1bP97952 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scn1bP97952 Gm4768-201ENSMUST00000206199 686 ntBASIC10.66□□□□□ -0.7
Scn1bP97952 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC10.66□□□□□ -0.7
Scn1bP97952 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scn1bP97952 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scn1bP97952 Gm6091-201ENSMUST00000098307 165 ntBASIC10.66□□□□□ -0.7
Scn1bP97952 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scn1bP97952 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Scn1bP97952 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Scn1bP97952 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Scn1bP97952 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scn1bP97952 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scn1bP97952 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC10.66□□□□□ -0.7
Scn1bP97952 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.66□□□□□ -0.7
Scn1bP97952 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scn1bP97952 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.66□□□□□ -0.7
Scn1bP97952 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Scn1bP97952 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Scn1bP97952 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Scn1bP97952 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.65□□□□□ -0.7
Scn1bP97952 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.65□□□□□ -0.7
Scn1bP97952 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Scn1bP97952 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms