Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Crnkl1P63154 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Crnkl1P63154 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Crnkl1P63154 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Crnkl1P63154 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Crnkl1P63154 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Crnkl1P63154 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Crnkl1P63154 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.57□□□□□ -0.56
Crnkl1P63154 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Crnkl1P63154 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Crnkl1P63154 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Crnkl1P63154 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Crnkl1P63154 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Crnkl1P63154 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Crnkl1P63154 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.57□□□□□ -0.56
Crnkl1P63154 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Crnkl1P63154 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Crnkl1P63154 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Crnkl1P63154 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC11.57□□□□□ -0.56
Crnkl1P63154 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Crnkl1P63154 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Crnkl1P63154 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Crnkl1P63154 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Crnkl1P63154 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Crnkl1P63154 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Crnkl1P63154 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Crnkl1P63154 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Crnkl1P63154 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Crnkl1P63154 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Crnkl1P63154 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Crnkl1P63154 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Crnkl1P63154 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Crnkl1P63154 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Crnkl1P63154 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.56□□□□□ -0.56
Crnkl1P63154 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.56□□□□□ -0.56
Crnkl1P63154 Gm23119-201ENSMUST00000158610 140 ntBASIC11.56□□□□□ -0.56
Crnkl1P63154 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Crnkl1P63154 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.56□□□□□ -0.56
Crnkl1P63154 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Crnkl1P63154 Gm42693-201ENSMUST00000196779 631 ntBASIC11.56□□□□□ -0.56
Crnkl1P63154 Gm18584-201ENSMUST00000203098 964 ntBASIC11.56□□□□□ -0.56
Crnkl1P63154 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.56□□□□□ -0.56
Crnkl1P63154 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.56□□□□□ -0.56
Crnkl1P63154 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.56□□□□□ -0.56
Crnkl1P63154 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Crnkl1P63154 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Crnkl1P63154 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Crnkl1P63154 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Crnkl1P63154 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Crnkl1P63154 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Crnkl1P63154 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Crnkl1P63154 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Crnkl1P63154 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.56□□□□□ -0.56
Crnkl1P63154 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Crnkl1P63154 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC11.56□□□□□ -0.56
Crnkl1P63154 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Crnkl1P63154 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.56□□□□□ -0.56
Crnkl1P63154 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Crnkl1P63154 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Crnkl1P63154 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.56□□□□□ -0.56
Crnkl1P63154 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.56□□□□□ -0.56
Crnkl1P63154 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Crnkl1P63154 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Crnkl1P63154 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Crnkl1P63154 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Crnkl1P63154 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Crnkl1P63154 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Crnkl1P63154 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Crnkl1P63154 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Crnkl1P63154 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Crnkl1P63154 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Crnkl1P63154 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Crnkl1P63154 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Crnkl1P63154 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Crnkl1P63154 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Crnkl1P63154 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Crnkl1P63154 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Crnkl1P63154 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Crnkl1P63154 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Crnkl1P63154 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Crnkl1P63154 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
Crnkl1P63154 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Crnkl1P63154 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Crnkl1P63154 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Crnkl1P63154 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Crnkl1P63154 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Crnkl1P63154 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Crnkl1P63154 Gm23931-201ENSMUST00000103842 109 ntBASIC11.55□□□□□ -0.56
Crnkl1P63154 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.55□□□□□ -0.56
Crnkl1P63154 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.55□□□□□ -0.56
Crnkl1P63154 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Crnkl1P63154 Gm11591-201ENSMUST00000120063 702 ntBASIC11.55□□□□□ -0.56
Crnkl1P63154 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.55□□□□□ -0.56
Crnkl1P63154 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.55□□□□□ -0.56
Crnkl1P63154 Gm25261-201ENSMUST00000157416 134 ntBASIC11.55□□□□□ -0.56
Crnkl1P63154 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Crnkl1P63154 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.55□□□□□ -0.56
Crnkl1P63154 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Crnkl1P63154 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Crnkl1P63154 Gm38002-201ENSMUST00000193255 180 ntBASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms