Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup43P59235 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Nup43P59235 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.05□□□□□ -0.64
Nup43P59235 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nup43P59235 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Nup43P59235 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.05□□□□□ -0.64
Nup43P59235 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC11.05□□□□□ -0.64
Nup43P59235 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup43P59235 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Nup43P59235 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC11.05□□□□□ -0.64
Nup43P59235 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.05□□□□□ -0.64
Nup43P59235 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup43P59235 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.05□□□□□ -0.64
Nup43P59235 Gm5982-201ENSMUST00000196234 512 ntBASIC11.05□□□□□ -0.64
Nup43P59235 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.05□□□□□ -0.64
Nup43P59235 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Nup43P59235 CT009764.1-201ENSMUST00000222260 483 ntBASIC11.05□□□□□ -0.64
Nup43P59235 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup43P59235 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup43P59235 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup43P59235 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup43P59235 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup43P59235 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Nup43P59235 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.05□□□□□ -0.64
Nup43P59235 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup43P59235 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup43P59235 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup43P59235 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Nup43P59235 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Nup43P59235 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup43P59235 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.04□□□□□ -0.64
Nup43P59235 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Nup43P59235 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.04□□□□□ -0.64
Nup43P59235 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup43P59235 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Nup43P59235 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.04□□□□□ -0.64
Nup43P59235 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup43P59235 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup43P59235 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nup43P59235 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nup43P59235 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.04□□□□□ -0.64
Nup43P59235 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup43P59235 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Nup43P59235 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Nup43P59235 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup43P59235 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Nup43P59235 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup43P59235 Gm13263-201ENSMUST00000121271 838 ntBASIC11.04□□□□□ -0.64
Nup43P59235 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Nup43P59235 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.04□□□□□ -0.64
Nup43P59235 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC11.04□□□□□ -0.64
Nup43P59235 Mir8093-201ENSMUST00000185043 137 ntBASIC11.04□□□□□ -0.64
Nup43P59235 Gm7430-201ENSMUST00000193824 1144 ntBASIC11.04□□□□□ -0.64
Nup43P59235 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.04□□□□□ -0.64
Nup43P59235 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.04□□□□□ -0.64
Nup43P59235 Gm6905-201ENSMUST00000205729 511 ntBASIC11.04□□□□□ -0.64
Nup43P59235 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup43P59235 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Nup43P59235 Gm6867-201ENSMUST00000219165 425 ntBASIC11.04□□□□□ -0.64
Nup43P59235 Ntng1-201ENSMUST00000051253 327 ntBASIC11.04□□□□□ -0.64
Nup43P59235 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup43P59235 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup43P59235 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup43P59235 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup43P59235 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup43P59235 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nup43P59235 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup43P59235 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup43P59235 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup43P59235 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nup43P59235 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup43P59235 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup43P59235 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nup43P59235 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Nup43P59235 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup43P59235 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup43P59235 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup43P59235 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nup43P59235 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup43P59235 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Nup43P59235 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup43P59235 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nup43P59235 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Nup43P59235 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup43P59235 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Nup43P59235 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup43P59235 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Nup43P59235 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup43P59235 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.03□□□□□ -0.64
Nup43P59235 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup43P59235 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup43P59235 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup43P59235 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Nup43P59235 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Nup43P59235 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nup43P59235 Gm13916-201ENSMUST00000117368 628 ntBASIC11.03□□□□□ -0.64
Nup43P59235 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.03□□□□□ -0.64
Nup43P59235 Gm11941-201ENSMUST00000119904 610 ntBASIC11.03□□□□□ -0.64
Nup43P59235 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.03□□□□□ -0.64
Nup43P59235 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 888.3 ms