Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
NcanP55066 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NcanP55066 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NcanP55066 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NcanP55066 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NcanP55066 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.29□□□□□ -0.44
NcanP55066 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NcanP55066 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
NcanP55066 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.29□□□□□ -0.44
NcanP55066 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NcanP55066 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NcanP55066 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NcanP55066 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NcanP55066 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
NcanP55066 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC12.28□□□□□ -0.44
NcanP55066 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
NcanP55066 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NcanP55066 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NcanP55066 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NcanP55066 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.28□□□□□ -0.44
NcanP55066 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
NcanP55066 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.28□□□□□ -0.44
NcanP55066 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NcanP55066 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NcanP55066 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NcanP55066 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
NcanP55066 Gm22937-201ENSMUST00000103954 131 ntBASIC12.28□□□□□ -0.44
NcanP55066 Mir1190-201ENSMUST00000116925 96 ntBASIC12.28□□□□□ -0.44
NcanP55066 Gm14441-201ENSMUST00000121960 540 ntBASIC12.28□□□□□ -0.44
NcanP55066 Gm14006-201ENSMUST00000122132 981 ntBASIC12.28□□□□□ -0.44
NcanP55066 Gm24992-201ENSMUST00000157412 130 ntBASIC12.28□□□□□ -0.44
NcanP55066 Gm25343-201ENSMUST00000157460 107 ntBASIC12.28□□□□□ -0.44
NcanP55066 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NcanP55066 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
NcanP55066 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
NcanP55066 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC12.28□□□□□ -0.44
NcanP55066 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC12.28□□□□□ -0.44
NcanP55066 Gm37284-201ENSMUST00000193607 539 ntBASIC12.28□□□□□ -0.44
NcanP55066 Gm37207-201ENSMUST00000194284 296 ntBASIC12.28□□□□□ -0.44
NcanP55066 Gm42660-201ENSMUST00000197733 947 ntBASIC12.28□□□□□ -0.44
NcanP55066 Gm43811-201ENSMUST00000202862 695 ntBASIC12.28□□□□□ -0.44
NcanP55066 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC12.28□□□□□ -0.44
NcanP55066 AC137871.1-201ENSMUST00000228278 475 ntBASIC12.28□□□□□ -0.44
NcanP55066 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
NcanP55066 Gm6478-201ENSMUST00000099450 742 ntBASIC12.28□□□□□ -0.44
NcanP55066 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
NcanP55066 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NcanP55066 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NcanP55066 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.28□□□□□ -0.44
NcanP55066 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NcanP55066 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NcanP55066 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NcanP55066 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC12.28□□□□□ -0.44
NcanP55066 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC12.28□□□□□ -0.44
NcanP55066 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NcanP55066 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NcanP55066 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NcanP55066 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NcanP55066 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
NcanP55066 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
NcanP55066 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
NcanP55066 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
NcanP55066 Gm14735-201ENSMUST00000121772 3088 ntBASIC12.27□□□□□ -0.44
NcanP55066 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC12.27□□□□□ -0.44
NcanP55066 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
NcanP55066 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
NcanP55066 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
NcanP55066 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
NcanP55066 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
NcanP55066 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
NcanP55066 AC022682.1-201ENSMUST00000224624 2023 ntBASIC12.27□□□□□ -0.44
NcanP55066 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
NcanP55066 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
NcanP55066 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NcanP55066 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
NcanP55066 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
NcanP55066 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NcanP55066 Snord23-201ENSMUST00000116828 109 ntBASIC12.27□□□□□ -0.45
NcanP55066 Gm14113-201ENSMUST00000121399 976 ntBASIC12.27□□□□□ -0.45
NcanP55066 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NcanP55066 Mir6387-201ENSMUST00000184042 108 ntBASIC12.27□□□□□ -0.45
NcanP55066 Gm30946-201ENSMUST00000198288 724 ntBASIC12.27□□□□□ -0.45
NcanP55066 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.27□□□□□ -0.45
NcanP55066 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NcanP55066 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NcanP55066 Cbx3-ps5-201ENSMUST00000091545 544 ntBASIC12.27□□□□□ -0.45
NcanP55066 Cbx3-ps2-201ENSMUST00000099421 544 ntBASIC12.27□□□□□ -0.45
NcanP55066 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
NcanP55066 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NcanP55066 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC12.27□□□□□ -0.45
NcanP55066 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
NcanP55066 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
NcanP55066 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
NcanP55066 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
NcanP55066 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NcanP55066 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
NcanP55066 Gm42970-201ENSMUST00000196407 1352 ntBASIC12.27□□□□□ -0.45
NcanP55066 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NcanP55066 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NcanP55066 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms