Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NrlP54846 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
NrlP54846 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NrlP54846 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
NrlP54846 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NrlP54846 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NrlP54846 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NrlP54846 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NrlP54846 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.46□□□□□ -0.41
NrlP54846 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NrlP54846 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
NrlP54846 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NrlP54846 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.46□□□□□ -0.41
NrlP54846 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NrlP54846 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NrlP54846 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
NrlP54846 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NrlP54846 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
NrlP54846 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NrlP54846 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NrlP54846 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
NrlP54846 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.46□□□□□ -0.41
NrlP54846 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NrlP54846 Gm11783-201ENSMUST00000119549 885 ntBASIC12.46□□□□□ -0.41
NrlP54846 Gm7150-201ENSMUST00000122032 981 ntBASIC12.46□□□□□ -0.41
NrlP54846 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
NrlP54846 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.46□□□□□ -0.41
NrlP54846 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NrlP54846 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.46□□□□□ -0.41
NrlP54846 Gm44158-201ENSMUST00000203881 505 ntBASIC12.46□□□□□ -0.41
NrlP54846 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.46□□□□□ -0.41
NrlP54846 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.46□□□□□ -0.41
NrlP54846 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NrlP54846 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NrlP54846 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
NrlP54846 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
NrlP54846 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
NrlP54846 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.46□□□□□ -0.42
NrlP54846 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
NrlP54846 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
NrlP54846 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
NrlP54846 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
NrlP54846 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.46□□□□□ -0.42
NrlP54846 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
NrlP54846 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.46□□□□□ -0.42
NrlP54846 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
NrlP54846 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
NrlP54846 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NrlP54846 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
NrlP54846 Gm10652-201ENSMUST00000199790 2622 ntBASIC12.45□□□□□ -0.42
NrlP54846 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NrlP54846 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NrlP54846 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NrlP54846 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.45□□□□□ -0.42
NrlP54846 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
NrlP54846 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NrlP54846 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
NrlP54846 Gm13668-201ENSMUST00000119237 1001 ntBASIC12.45□□□□□ -0.42
NrlP54846 Gm12628-201ENSMUST00000122193 382 ntBASIC12.45□□□□□ -0.42
NrlP54846 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.45□□□□□ -0.42
NrlP54846 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NrlP54846 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NrlP54846 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NrlP54846 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.45□□□□□ -0.42
NrlP54846 Gm38151-201ENSMUST00000195085 289 ntBASIC12.45□□□□□ -0.42
NrlP54846 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.45□□□□□ -0.42
NrlP54846 Gm45113-201ENSMUST00000207518 165 ntBASIC12.45□□□□□ -0.42
NrlP54846 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC12.45□□□□□ -0.42
NrlP54846 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.45□□□□□ -0.42
NrlP54846 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NrlP54846 n-R5s211-201ENSMUST00000093689 119 ntBASIC12.45□□□□□ -0.42
NrlP54846 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NrlP54846 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NrlP54846 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NrlP54846 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.45□□□□□ -0.42
NrlP54846 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NrlP54846 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NrlP54846 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
NrlP54846 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NrlP54846 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NrlP54846 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.45□□□□□ -0.42
NrlP54846 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
NrlP54846 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NrlP54846 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NrlP54846 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
NrlP54846 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NrlP54846 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NrlP54846 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NrlP54846 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NrlP54846 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.44□□□□□ -0.42
NrlP54846 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.44□□□□□ -0.42
NrlP54846 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
NrlP54846 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NrlP54846 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NrlP54846 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.44□□□□□ -0.42
NrlP54846 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NrlP54846 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NrlP54846 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
NrlP54846 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.44□□□□□ -0.42
NrlP54846 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms