Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atxn1P54254 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atxn1P54254 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atxn1P54254 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atxn1P54254 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Atxn1P54254 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Atxn1P54254 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atxn1P54254 Gm8731-201ENSMUST00000118088 412 ntBASIC11.66□□□□□ -0.54
Atxn1P54254 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Atxn1P54254 Gm12030-201ENSMUST00000121917 223 ntBASIC11.66□□□□□ -0.54
Atxn1P54254 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC11.66□□□□□ -0.54
Atxn1P54254 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Atxn1P54254 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Atxn1P54254 Gm9022-201ENSMUST00000182482 992 ntBASIC11.66□□□□□ -0.54
Atxn1P54254 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Atxn1P54254 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atxn1P54254 Trav11n-201ENSMUST00000200113 343 ntBASIC11.66□□□□□ -0.54
Atxn1P54254 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.66□□□□□ -0.54
Atxn1P54254 Gm14005-208ENSMUST00000223654 681 ntBASIC11.66□□□□□ -0.54
Atxn1P54254 AC154361.2-201ENSMUST00000224747 943 ntBASIC11.66□□□□□ -0.54
Atxn1P54254 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atxn1P54254 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Atxn1P54254 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Atxn1P54254 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atxn1P54254 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atxn1P54254 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atxn1P54254 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atxn1P54254 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atxn1P54254 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atxn1P54254 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Atxn1P54254 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.66□□□□□ -0.54
Atxn1P54254 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.66□□□□□ -0.54
Atxn1P54254 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atxn1P54254 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atxn1P54254 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atxn1P54254 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Atxn1P54254 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Atxn1P54254 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Atxn1P54254 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Atxn1P54254 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Atxn1P54254 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Atxn1P54254 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Atxn1P54254 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Atxn1P54254 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Atxn1P54254 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Atxn1P54254 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Atxn1P54254 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Atxn1P54254 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Atxn1P54254 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Atxn1P54254 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.65□□□□□ -0.54
Atxn1P54254 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Atxn1P54254 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Atxn1P54254 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Atxn1P54254 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Atxn1P54254 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Atxn1P54254 Gm11511-201ENSMUST00000118146 540 ntBASIC11.65□□□□□ -0.54
Atxn1P54254 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.65□□□□□ -0.54
Atxn1P54254 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Atxn1P54254 Gm22146-201ENSMUST00000157397 288 ntBASIC11.65□□□□□ -0.54
Atxn1P54254 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Atxn1P54254 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Atxn1P54254 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.65□□□□□ -0.54
Atxn1P54254 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Atxn1P54254 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC11.65□□□□□ -0.54
Atxn1P54254 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.65□□□□□ -0.54
Atxn1P54254 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.65□□□□□ -0.54
Atxn1P54254 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC11.65□□□□□ -0.54
Atxn1P54254 AC165154.1-201ENSMUST00000226661 340 ntBASIC11.65□□□□□ -0.54
Atxn1P54254 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Atxn1P54254 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Atxn1P54254 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Atxn1P54254 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Atxn1P54254 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Atxn1P54254 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Atxn1P54254 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.65□□□□□ -0.54
Atxn1P54254 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Atxn1P54254 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Atxn1P54254 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Atxn1P54254 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Atxn1P54254 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Atxn1P54254 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Atxn1P54254 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Atxn1P54254 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.65□□□□□ -0.55
Atxn1P54254 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Atxn1P54254 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Atxn1P54254 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.65□□□□□ -0.55
Atxn1P54254 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Atxn1P54254 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Atxn1P54254 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Atxn1P54254 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Atxn1P54254 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Atxn1P54254 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.64□□□□□ -0.55
Atxn1P54254 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Atxn1P54254 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Atxn1P54254 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Atxn1P54254 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Atxn1P54254 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Atxn1P54254 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Atxn1P54254 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Atxn1P54254 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms