Protein–RNA interactions for Protein: P50404

Sftpd, Pulmonary surfactant-associated protein D, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpdP50404 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpdP50404 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpdP50404 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpdP50404 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SftpdP50404 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SftpdP50404 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpdP50404 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpdP50404 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.3□□□□□ -0.44
SftpdP50404 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
SftpdP50404 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpdP50404 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpdP50404 Gm13461-201ENSMUST00000120980 662 ntBASIC12.3□□□□□ -0.44
SftpdP50404 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.3□□□□□ -0.44
SftpdP50404 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.3□□□□□ -0.44
SftpdP50404 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SftpdP50404 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.3□□□□□ -0.44
SftpdP50404 Gm5733-201ENSMUST00000190232 939 ntBASIC12.3□□□□□ -0.44
SftpdP50404 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.3□□□□□ -0.44
SftpdP50404 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
SftpdP50404 Gm19208-201ENSMUST00000213861 912 ntBASIC12.3□□□□□ -0.44
SftpdP50404 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SftpdP50404 Gm5369-201ENSMUST00000217499 588 ntBASIC12.3□□□□□ -0.44
SftpdP50404 Gm6867-201ENSMUST00000219165 425 ntBASIC12.3□□□□□ -0.44
SftpdP50404 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SftpdP50404 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.3□□□□□ -0.44
SftpdP50404 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
SftpdP50404 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpdP50404 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpdP50404 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpdP50404 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
SftpdP50404 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpdP50404 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpdP50404 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SftpdP50404 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpdP50404 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
SftpdP50404 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
SftpdP50404 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpdP50404 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpdP50404 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpdP50404 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.29□□□□□ -0.44
SftpdP50404 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SftpdP50404 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SftpdP50404 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SftpdP50404 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SftpdP50404 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SftpdP50404 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SftpdP50404 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SftpdP50404 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SftpdP50404 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
SftpdP50404 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
SftpdP50404 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SftpdP50404 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.29□□□□□ -0.44
SftpdP50404 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
SftpdP50404 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.29□□□□□ -0.44
SftpdP50404 Gm13263-201ENSMUST00000121271 838 ntBASIC12.29□□□□□ -0.44
SftpdP50404 Gm43002-201ENSMUST00000200310 155 ntBASIC12.29□□□□□ -0.44
SftpdP50404 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SftpdP50404 Gm18065-201ENSMUST00000221395 526 ntBASIC12.29□□□□□ -0.44
SftpdP50404 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SftpdP50404 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SftpdP50404 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.29□□□□□ -0.44
SftpdP50404 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.29□□□□□ -0.44
SftpdP50404 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SftpdP50404 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SftpdP50404 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SftpdP50404 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SftpdP50404 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SftpdP50404 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SftpdP50404 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SftpdP50404 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
SftpdP50404 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
SftpdP50404 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SftpdP50404 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SftpdP50404 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SftpdP50404 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SftpdP50404 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SftpdP50404 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SftpdP50404 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SftpdP50404 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SftpdP50404 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.28□□□□□ -0.44
SftpdP50404 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SftpdP50404 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SftpdP50404 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SftpdP50404 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SftpdP50404 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.28□□□□□ -0.44
SftpdP50404 Gm13916-201ENSMUST00000117368 628 ntBASIC12.28□□□□□ -0.44
SftpdP50404 Gm7851-201ENSMUST00000117574 323 ntBASIC12.28□□□□□ -0.44
SftpdP50404 Gm4909-201ENSMUST00000118749 794 ntBASIC12.28□□□□□ -0.44
SftpdP50404 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.28□□□□□ -0.44
SftpdP50404 Gm25732-201ENSMUST00000175168 60 ntBASIC12.28□□□□□ -0.44
SftpdP50404 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.28□□□□□ -0.44
SftpdP50404 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
SftpdP50404 Gm38151-201ENSMUST00000195085 289 ntBASIC12.28□□□□□ -0.44
SftpdP50404 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.28□□□□□ -0.44
SftpdP50404 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SftpdP50404 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SftpdP50404 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SftpdP50404 Gm7848-201ENSMUST00000210739 718 ntBASIC12.28□□□□□ -0.44
SftpdP50404 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.28□□□□□ -0.44
SftpdP50404 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms