Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.31□□□□□ -0.44
LmnaP48678 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.31□□□□□ -0.44
LmnaP48678 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LmnaP48678 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
LmnaP48678 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
LmnaP48678 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LmnaP48678 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LmnaP48678 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
LmnaP48678 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LmnaP48678 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
LmnaP48678 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.31□□□□□ -0.44
LmnaP48678 Mir1901-201ENSMUST00000122616 78 ntBASIC12.31□□□□□ -0.44
LmnaP48678 Rpa3-201ENSMUST00000012627 670 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LmnaP48678 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.31□□□□□ -0.44
LmnaP48678 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LmnaP48678 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LmnaP48678 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
LmnaP48678 Gm6771-201ENSMUST00000182716 1001 ntBASIC12.31□□□□□ -0.44
LmnaP48678 Gm37028-201ENSMUST00000194276 107 ntBASIC12.31□□□□□ -0.44
LmnaP48678 Gm38217-201ENSMUST00000194358 910 ntBASIC12.31□□□□□ -0.44
LmnaP48678 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.31□□□□□ -0.44
LmnaP48678 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC12.31□□□□□ -0.44
LmnaP48678 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC12.31□□□□□ -0.44
LmnaP48678 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.31□□□□□ -0.44
LmnaP48678 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LmnaP48678 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.31□□□□□ -0.44
LmnaP48678 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.31□□□□□ -0.44
LmnaP48678 AC154184.3-201ENSMUST00000225620 1090 ntBASIC12.31□□□□□ -0.44
LmnaP48678 Ginm1-202ENSMUST00000065124 300 ntBASIC12.31□□□□□ -0.44
LmnaP48678 Rnf212-201ENSMUST00000068946 288 ntTSL 5 BASIC12.31□□□□□ -0.44
LmnaP48678 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LmnaP48678 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LmnaP48678 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LmnaP48678 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LmnaP48678 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LmnaP48678 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LmnaP48678 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LmnaP48678 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LmnaP48678 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
LmnaP48678 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LmnaP48678 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LmnaP48678 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LmnaP48678 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LmnaP48678 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
LmnaP48678 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LmnaP48678 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.3□□□□□ -0.44
LmnaP48678 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LmnaP48678 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LmnaP48678 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LmnaP48678 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LmnaP48678 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LmnaP48678 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
LmnaP48678 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LmnaP48678 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LmnaP48678 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LmnaP48678 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.3□□□□□ -0.44
LmnaP48678 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
LmnaP48678 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LmnaP48678 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LmnaP48678 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
LmnaP48678 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LmnaP48678 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC12.3□□□□□ -0.44
LmnaP48678 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.3□□□□□ -0.44
LmnaP48678 Gm12628-201ENSMUST00000122193 382 ntBASIC12.3□□□□□ -0.44
LmnaP48678 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.3□□□□□ -0.44
LmnaP48678 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.3□□□□□ -0.44
LmnaP48678 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.3□□□□□ -0.44
LmnaP48678 Gm37604-201ENSMUST00000191749 1272 ntBASIC12.3□□□□□ -0.44
LmnaP48678 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.3□□□□□ -0.44
LmnaP48678 Gm18038-201ENSMUST00000197900 485 ntBASIC12.3□□□□□ -0.44
LmnaP48678 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC12.3□□□□□ -0.44
LmnaP48678 Gm3793-201ENSMUST00000204973 672 ntBASIC12.3□□□□□ -0.44
LmnaP48678 Gm6905-201ENSMUST00000205729 511 ntBASIC12.3□□□□□ -0.44
LmnaP48678 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC12.3□□□□□ -0.44
LmnaP48678 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.3□□□□□ -0.44
LmnaP48678 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.3□□□□□ -0.44
LmnaP48678 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.3□□□□□ -0.44
LmnaP48678 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LmnaP48678 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LmnaP48678 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LmnaP48678 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LmnaP48678 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LmnaP48678 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LmnaP48678 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
LmnaP48678 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
LmnaP48678 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LmnaP48678 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LmnaP48678 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LmnaP48678 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LmnaP48678 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LmnaP48678 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
LmnaP48678 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LmnaP48678 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.29□□□□□ -0.44
LmnaP48678 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.29□□□□□ -0.44
LmnaP48678 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LmnaP48678 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LmnaP48678 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LmnaP48678 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LmnaP48678 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.29□□□□□ -0.44
LmnaP48678 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms