Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 B230118H07Rik-201ENSMUST00000090513 969 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox18P43680 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.47□□□□□ -0.57
Sox18P43680 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox18P43680 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox18P43680 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox18P43680 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox18P43680 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox18P43680 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Sox18P43680 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Sox18P43680 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox18P43680 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox18P43680 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox18P43680 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox18P43680 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox18P43680 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.47□□□□□ -0.57
Sox18P43680 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Sox18P43680 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox18P43680 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox18P43680 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox18P43680 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.47□□□□□ -0.57
Sox18P43680 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox18P43680 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox18P43680 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sox18P43680 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Sox18P43680 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Sox18P43680 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.46□□□□□ -0.57
Sox18P43680 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Sox18P43680 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sox18P43680 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.57
Sox18P43680 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox18P43680 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Sox18P43680 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox18P43680 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sox18P43680 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.46□□□□□ -0.57
Sox18P43680 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sox18P43680 Tspan8-203ENSMUST00000179196 1381 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox18P43680 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Sox18P43680 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox18P43680 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Sox18P43680 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Sox18P43680 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.46□□□□□ -0.57
Sox18P43680 Gm12788-201ENSMUST00000119090 308 ntBASIC11.46□□□□□ -0.57
Sox18P43680 Gm13924-201ENSMUST00000119899 486 ntBASIC11.46□□□□□ -0.57
Sox18P43680 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC11.46□□□□□ -0.57
Sox18P43680 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sox18P43680 Gm23119-201ENSMUST00000158610 140 ntBASIC11.46□□□□□ -0.57
Sox18P43680 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC11.46□□□□□ -0.57
Sox18P43680 Gm8451-201ENSMUST00000170338 447 ntBASIC11.46□□□□□ -0.57
Sox18P43680 Gm8815-201ENSMUST00000173809 620 ntBASIC11.46□□□□□ -0.57
Sox18P43680 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sox18P43680 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC11.46□□□□□ -0.57
Sox18P43680 Gm9931-201ENSMUST00000193584 1185 ntBASIC11.46□□□□□ -0.57
Sox18P43680 Gm4870-201ENSMUST00000198525 1251 ntBASIC11.46□□□□□ -0.57
Sox18P43680 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC11.46□□□□□ -0.57
Sox18P43680 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC11.46□□□□□ -0.57
Sox18P43680 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox18P43680 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox18P43680 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox18P43680 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Sox18P43680 Gm7536-201ENSMUST00000077389 444 ntBASIC11.46□□□□□ -0.57
Sox18P43680 Gm5453-201ENSMUST00000080866 447 ntBASIC11.46□□□□□ -0.57
Sox18P43680 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox18P43680 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox18P43680 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Sox18P43680 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox18P43680 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox18P43680 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.46□□□□□ -0.58
Sox18P43680 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.46□□□□□ -0.58
Sox18P43680 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox18P43680 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox18P43680 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox18P43680 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox18P43680 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Sox18P43680 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox18P43680 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox18P43680 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Sox18P43680 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox18P43680 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox18P43680 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox18P43680 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox18P43680 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox18P43680 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox18P43680 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox18P43680 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.45□□□□□ -0.58
Sox18P43680 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.45□□□□□ -0.58
Sox18P43680 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox18P43680 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox18P43680 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.45□□□□□ -0.58
Sox18P43680 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sox18P43680 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox18P43680 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.45□□□□□ -0.58
Sox18P43680 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sox18P43680 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox18P43680 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sox18P43680 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sox18P43680 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC11.45□□□□□ -0.58
Sox18P43680 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Sox18P43680 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox18P43680 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox18P43680 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms