Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11.1□□□□□ -0.63
Cdx2P43241 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx2P43241 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.1□□□□□ -0.63
Cdx2P43241 Gm18201-201ENSMUST00000174735 875 ntBASIC11.1□□□□□ -0.63
Cdx2P43241 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.1□□□□□ -0.63
Cdx2P43241 Gm28833-201ENSMUST00000189671 559 ntBASIC11.1□□□□□ -0.63
Cdx2P43241 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx2P43241 Gm44552-201ENSMUST00000205458 1247 ntBASIC11.1□□□□□ -0.63
Cdx2P43241 Gm18706-201ENSMUST00000210053 1066 ntBASIC11.1□□□□□ -0.63
Cdx2P43241 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Cdx2P43241 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC11.1□□□□□ -0.63
Cdx2P43241 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx2P43241 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx2P43241 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC11.1□□□□□ -0.63
Cdx2P43241 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Cdx2P43241 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx2P43241 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx2P43241 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.1□□□□□ -0.63
Cdx2P43241 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx2P43241 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx2P43241 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx2P43241 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx2P43241 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx2P43241 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx2P43241 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx2P43241 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx2P43241 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx2P43241 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx2P43241 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx2P43241 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cdx2P43241 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.1□□□□□ -0.63
Cdx2P43241 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx2P43241 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx2P43241 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx2P43241 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdx2P43241 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdx2P43241 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Cdx2P43241 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdx2P43241 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdx2P43241 Gm21759-201ENSMUST00000178345 1828 ntBASIC11.09□□□□□ -0.63
Cdx2P43241 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.09□□□□□ -0.63
Cdx2P43241 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdx2P43241 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.09□□□□□ -0.63
Cdx2P43241 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Cdx2P43241 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdx2P43241 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdx2P43241 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdx2P43241 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdx2P43241 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.09□□□□□ -0.63
Cdx2P43241 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdx2P43241 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdx2P43241 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdx2P43241 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.09□□□□□ -0.63
Cdx2P43241 Gm25053-201ENSMUST00000103982 133 ntBASIC11.09□□□□□ -0.63
Cdx2P43241 Gm25922-201ENSMUST00000104281 130 ntBASIC11.09□□□□□ -0.63
Cdx2P43241 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdx2P43241 Gm12194-201ENSMUST00000117756 1012 ntBASIC11.09□□□□□ -0.63
Cdx2P43241 Gm15036-201ENSMUST00000118880 400 ntBASIC11.09□□□□□ -0.63
Cdx2P43241 Gm12791-201ENSMUST00000120788 655 ntBASIC11.09□□□□□ -0.63
Cdx2P43241 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.09□□□□□ -0.63
Cdx2P43241 Gm25492-201ENSMUST00000157383 129 ntBASIC11.09□□□□□ -0.63
Cdx2P43241 Gm24679-201ENSMUST00000158762 111 ntBASIC11.09□□□□□ -0.63
Cdx2P43241 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.09□□□□□ -0.63
Cdx2P43241 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdx2P43241 Gm9081-201ENSMUST00000182346 991 ntBASIC11.09□□□□□ -0.63
Cdx2P43241 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdx2P43241 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.09□□□□□ -0.63
Cdx2P43241 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.09□□□□□ -0.63
Cdx2P43241 Gm25053-202ENSMUST00000199731 132 ntBASIC11.09□□□□□ -0.63
Cdx2P43241 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdx2P43241 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdx2P43241 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC11.09□□□□□ -0.63
Cdx2P43241 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Cdx2P43241 Gm6390-201ENSMUST00000215034 589 ntBASIC11.09□□□□□ -0.63
Cdx2P43241 AC153152.3-201ENSMUST00000222188 1135 ntBASIC11.09□□□□□ -0.63
Cdx2P43241 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdx2P43241 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC11.09□□□□□ -0.63
Cdx2P43241 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdx2P43241 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdx2P43241 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdx2P43241 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdx2P43241 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdx2P43241 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Cdx2P43241 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdx2P43241 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Cdx2P43241 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdx2P43241 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC11.09□□□□□ -0.63
Cdx2P43241 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdx2P43241 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdx2P43241 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdx2P43241 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.09□□□□□ -0.63
Cdx2P43241 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.63
Cdx2P43241 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx2P43241 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.08□□□□□ -0.64
Cdx2P43241 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx2P43241 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx2P43241 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx2P43241 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Cdx2P43241 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx2P43241 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms