Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TfamP40630 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
TfamP40630 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TfamP40630 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TfamP40630 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TfamP40630 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TfamP40630 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TfamP40630 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TfamP40630 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.32□□□□□ -0.6
TfamP40630 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
TfamP40630 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TfamP40630 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TfamP40630 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TfamP40630 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TfamP40630 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
TfamP40630 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
TfamP40630 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
TfamP40630 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TfamP40630 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
TfamP40630 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.31□□□□□ -0.6
TfamP40630 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TfamP40630 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TfamP40630 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TfamP40630 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TfamP40630 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
TfamP40630 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TfamP40630 Gm15004-201ENSMUST00000119192 630 ntBASIC11.31□□□□□ -0.6
TfamP40630 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
TfamP40630 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
TfamP40630 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.31□□□□□ -0.6
TfamP40630 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TfamP40630 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TfamP40630 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.31□□□□□ -0.6
TfamP40630 Gm43962-201ENSMUST00000203898 190 ntBASIC11.31□□□□□ -0.6
TfamP40630 Gm44651-201ENSMUST00000207343 372 ntBASIC11.31□□□□□ -0.6
TfamP40630 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.31□□□□□ -0.6
TfamP40630 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.31□□□□□ -0.6
TfamP40630 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.31□□□□□ -0.6
TfamP40630 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
TfamP40630 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
TfamP40630 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
TfamP40630 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TfamP40630 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.31□□□□□ -0.6
TfamP40630 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TfamP40630 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TfamP40630 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TfamP40630 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC11.31□□□□□ -0.6
TfamP40630 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
TfamP40630 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TfamP40630 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TfamP40630 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
TfamP40630 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.31□□□□□ -0.6
TfamP40630 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TfamP40630 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TfamP40630 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
TfamP40630 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.3□□□□□ -0.6
TfamP40630 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
TfamP40630 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TfamP40630 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.3□□□□□ -0.6
TfamP40630 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.3□□□□□ -0.6
TfamP40630 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
TfamP40630 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TfamP40630 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
TfamP40630 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TfamP40630 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TfamP40630 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
TfamP40630 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TfamP40630 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TfamP40630 Gm26286-201ENSMUST00000104166 134 ntBASIC11.3□□□□□ -0.6
TfamP40630 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TfamP40630 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.3□□□□□ -0.6
TfamP40630 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
TfamP40630 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TfamP40630 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.3□□□□□ -0.6
TfamP40630 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TfamP40630 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.3□□□□□ -0.6
TfamP40630 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TfamP40630 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TfamP40630 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
TfamP40630 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.3□□□□□ -0.6
TfamP40630 Gm8420-201ENSMUST00000097103 598 ntBASIC11.3□□□□□ -0.6
TfamP40630 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TfamP40630 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
TfamP40630 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
TfamP40630 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
TfamP40630 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TfamP40630 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TfamP40630 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
TfamP40630 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
TfamP40630 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TfamP40630 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
TfamP40630 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TfamP40630 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
TfamP40630 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC11.3□□□□□ -0.6
TfamP40630 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
TfamP40630 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.3□□□□□ -0.6
TfamP40630 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TfamP40630 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.3□□□□□ -0.6
TfamP40630 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.3□□□□□ -0.6
TfamP40630 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms