Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl12P40224 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl12P40224 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Cxcl12P40224 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC12.01□□□□□ -0.49
Cxcl12P40224 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl12P40224 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC12.01□□□□□ -0.49
Cxcl12P40224 Gm15625-201ENSMUST00000117617 1093 ntBASIC12.01□□□□□ -0.49
Cxcl12P40224 Gm24943-201ENSMUST00000158329 433 ntBASIC12.01□□□□□ -0.49
Cxcl12P40224 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC12.01□□□□□ -0.49
Cxcl12P40224 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC12.01□□□□□ -0.49
Cxcl12P40224 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.01□□□□□ -0.49
Cxcl12P40224 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl12P40224 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Cxcl12P40224 AC121357.1-201ENSMUST00000227365 608 ntBASIC12.01□□□□□ -0.49
Cxcl12P40224 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl12P40224 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl12P40224 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl12P40224 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl12P40224 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl12P40224 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl12P40224 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.01□□□□□ -0.49
Cxcl12P40224 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl12P40224 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cxcl12P40224 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl12P40224 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl12P40224 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl12P40224 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl12P40224 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl12P40224 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cxcl12P40224 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl12P40224 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC12.01□□□□□ -0.49
Cxcl12P40224 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cxcl12P40224 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl12P40224 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl12P40224 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl12P40224 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl12P40224 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl12P40224 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl12P40224 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cxcl12P40224 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cxcl12P40224 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl12P40224 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12□□□□□ -0.49
Cxcl12P40224 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl12P40224 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl12P40224 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl12P40224 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl12P40224 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl12P40224 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12□□□□□ -0.49
Cxcl12P40224 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl12P40224 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cxcl12P40224 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl12P40224 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cxcl12P40224 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl12P40224 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Cxcl12P40224 Gm12389-201ENSMUST00000117696 418 ntBASIC12□□□□□ -0.49
Cxcl12P40224 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl12P40224 Gm24328-201ENSMUST00000175104 67 ntBASIC12□□□□□ -0.49
Cxcl12P40224 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl12P40224 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cxcl12P40224 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cxcl12P40224 Gm5267-201ENSMUST00000191574 1045 ntBASIC12□□□□□ -0.49
Cxcl12P40224 Gm37452-201ENSMUST00000194416 1160 ntBASIC12□□□□□ -0.49
Cxcl12P40224 Gm35960-201ENSMUST00000202712 767 ntBASIC12□□□□□ -0.49
Cxcl12P40224 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC12□□□□□ -0.49
Cxcl12P40224 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC12□□□□□ -0.49
Cxcl12P40224 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12□□□□□ -0.49
Cxcl12P40224 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC12□□□□□ -0.49
Cxcl12P40224 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC12□□□□□ -0.49
Cxcl12P40224 CT010480.2-201ENSMUST00000225424 737 ntBASIC12□□□□□ -0.49
Cxcl12P40224 AC164099.1-201ENSMUST00000227780 333 ntBASIC12□□□□□ -0.49
Cxcl12P40224 Gm5449-201ENSMUST00000081132 357 ntBASIC12□□□□□ -0.49
Cxcl12P40224 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cxcl12P40224 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12□□□□□ -0.49
Cxcl12P40224 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl12P40224 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl12P40224 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cxcl12P40224 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cxcl12P40224 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl12P40224 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl12P40224 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl12P40224 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl12P40224 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Cxcl12P40224 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl12P40224 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cxcl12P40224 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12□□□□□ -0.49
Cxcl12P40224 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl12P40224 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl12P40224 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl12P40224 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cxcl12P40224 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cxcl12P40224 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl12P40224 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cxcl12P40224 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl12P40224 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl12P40224 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl12P40224 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl12P40224 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.99□□□□□ -0.49
Cxcl12P40224 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.99□□□□□ -0.49
Cxcl12P40224 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl12P40224 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms