Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh4P39038 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh4P39038 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh4P39038 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh4P39038 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Cdh4P39038 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh4P39038 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.22□□□□□ -0.61
Cdh4P39038 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.22□□□□□ -0.61
Cdh4P39038 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.22□□□□□ -0.61
Cdh4P39038 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh4P39038 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Cdh4P39038 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh4P39038 Gm8815-201ENSMUST00000173809 620 ntBASIC11.22□□□□□ -0.61
Cdh4P39038 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Cdh4P39038 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.22□□□□□ -0.61
Cdh4P39038 Gm5733-201ENSMUST00000190232 939 ntBASIC11.22□□□□□ -0.61
Cdh4P39038 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh4P39038 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.22□□□□□ -0.61
Cdh4P39038 Gm6450-201ENSMUST00000200896 574 ntBASIC11.22□□□□□ -0.61
Cdh4P39038 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.22□□□□□ -0.61
Cdh4P39038 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.22□□□□□ -0.61
Cdh4P39038 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.22□□□□□ -0.61
Cdh4P39038 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.22□□□□□ -0.61
Cdh4P39038 Gm45575-201ENSMUST00000210283 548 ntBASIC11.22□□□□□ -0.61
Cdh4P39038 Gm5369-201ENSMUST00000217499 588 ntBASIC11.22□□□□□ -0.61
Cdh4P39038 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Cdh4P39038 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.22□□□□□ -0.61
Cdh4P39038 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh4P39038 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh4P39038 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cdh4P39038 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cdh4P39038 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh4P39038 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Cdh4P39038 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh4P39038 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.22□□□□□ -0.61
Cdh4P39038 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh4P39038 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh4P39038 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh4P39038 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cdh4P39038 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh4P39038 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh4P39038 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh4P39038 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh4P39038 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.22□□□□□ -0.61
Cdh4P39038 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh4P39038 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh4P39038 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.21□□□□□ -0.61
Cdh4P39038 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.21□□□□□ -0.61
Cdh4P39038 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.21□□□□□ -0.61
Cdh4P39038 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh4P39038 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh4P39038 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh4P39038 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh4P39038 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.21□□□□□ -0.61
Cdh4P39038 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh4P39038 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh4P39038 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh4P39038 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh4P39038 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.21□□□□□ -0.61
Cdh4P39038 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.21□□□□□ -0.61
Cdh4P39038 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh4P39038 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh4P39038 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh4P39038 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.21□□□□□ -0.61
Cdh4P39038 Gm11941-201ENSMUST00000119904 610 ntBASIC11.21□□□□□ -0.61
Cdh4P39038 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.21□□□□□ -0.61
Cdh4P39038 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.21□□□□□ -0.61
Cdh4P39038 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.21□□□□□ -0.61
Cdh4P39038 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.21□□□□□ -0.61
Cdh4P39038 Gm26461-201ENSMUST00000175064 290 ntBASIC11.21□□□□□ -0.61
Cdh4P39038 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh4P39038 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.21□□□□□ -0.61
Cdh4P39038 Gm27530-201ENSMUST00000184096 98 ntBASIC11.21□□□□□ -0.61
Cdh4P39038 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.21□□□□□ -0.61
Cdh4P39038 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.21□□□□□ -0.61
Cdh4P39038 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.21□□□□□ -0.62
Cdh4P39038 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh4P39038 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh4P39038 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh4P39038 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh4P39038 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh4P39038 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.62
Cdh4P39038 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh4P39038 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh4P39038 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh4P39038 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh4P39038 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh4P39038 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh4P39038 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh4P39038 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh4P39038 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.21□□□□□ -0.62
Cdh4P39038 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Cdh4P39038 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh4P39038 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh4P39038 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh4P39038 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh4P39038 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Cdh4P39038 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh4P39038 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh4P39038 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms