Protein–RNA interactions for Protein: P29268

Ctgf, Connective tissue growth factor, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtgfP29268 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CtgfP29268 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CtgfP29268 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CtgfP29268 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.87□□□□□ -0.67
CtgfP29268 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.87□□□□□ -0.67
CtgfP29268 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
CtgfP29268 Gm43081-201ENSMUST00000199082 1380 ntBASIC10.87□□□□□ -0.67
CtgfP29268 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CtgfP29268 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CtgfP29268 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.87□□□□□ -0.67
CtgfP29268 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CtgfP29268 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CtgfP29268 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CtgfP29268 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.87□□□□□ -0.67
CtgfP29268 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CtgfP29268 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CtgfP29268 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CtgfP29268 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CtgfP29268 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CtgfP29268 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CtgfP29268 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
CtgfP29268 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
CtgfP29268 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CtgfP29268 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CtgfP29268 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CtgfP29268 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
CtgfP29268 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC10.86□□□□□ -0.67
CtgfP29268 Gm14071-201ENSMUST00000117817 509 ntBASIC10.86□□□□□ -0.67
CtgfP29268 Gm14314-201ENSMUST00000118225 1015 ntBASIC10.86□□□□□ -0.67
CtgfP29268 Gm8737-201ENSMUST00000122208 642 ntBASIC10.86□□□□□ -0.67
CtgfP29268 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
CtgfP29268 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CtgfP29268 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC10.86□□□□□ -0.67
CtgfP29268 Gm22902-201ENSMUST00000158488 302 ntBASIC10.86□□□□□ -0.67
CtgfP29268 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
CtgfP29268 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
CtgfP29268 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC10.86□□□□□ -0.67
CtgfP29268 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
CtgfP29268 Gm2517-201ENSMUST00000215651 348 ntBASIC10.86□□□□□ -0.67
CtgfP29268 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CtgfP29268 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.86□□□□□ -0.67
CtgfP29268 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CtgfP29268 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
CtgfP29268 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
CtgfP29268 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CtgfP29268 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CtgfP29268 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CtgfP29268 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CtgfP29268 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
CtgfP29268 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CtgfP29268 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
CtgfP29268 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
CtgfP29268 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CtgfP29268 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CtgfP29268 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CtgfP29268 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CtgfP29268 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CtgfP29268 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CtgfP29268 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CtgfP29268 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CtgfP29268 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.86□□□□□ -0.67
CtgfP29268 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
CtgfP29268 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CtgfP29268 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CtgfP29268 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CtgfP29268 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CtgfP29268 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC10.85□□□□□ -0.67
CtgfP29268 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CtgfP29268 Gm9387-201ENSMUST00000098624 1320 ntBASIC10.85□□□□□ -0.67
CtgfP29268 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.85□□□□□ -0.67
CtgfP29268 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.85□□□□□ -0.67
CtgfP29268 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CtgfP29268 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CtgfP29268 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
CtgfP29268 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CtgfP29268 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CtgfP29268 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
CtgfP29268 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CtgfP29268 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CtgfP29268 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
CtgfP29268 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CtgfP29268 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.85□□□□□ -0.67
CtgfP29268 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CtgfP29268 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CtgfP29268 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CtgfP29268 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC10.85□□□□□ -0.67
CtgfP29268 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.85□□□□□ -0.67
CtgfP29268 Gm15881-201ENSMUST00000148792 942 ntBASIC10.85□□□□□ -0.67
CtgfP29268 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
CtgfP29268 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC10.85□□□□□ -0.67
CtgfP29268 Gm20495-201ENSMUST00000173902 235 ntBASIC10.85□□□□□ -0.67
CtgfP29268 Gm23045-201ENSMUST00000175041 96 ntBASIC10.85□□□□□ -0.67
CtgfP29268 Gm4654-201ENSMUST00000183305 982 ntBASIC10.85□□□□□ -0.67
CtgfP29268 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC10.85□□□□□ -0.67
CtgfP29268 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CtgfP29268 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.85□□□□□ -0.67
CtgfP29268 Gm43852-201ENSMUST00000202098 917 ntBASIC10.85□□□□□ -0.67
CtgfP29268 Gm3786-201ENSMUST00000202659 378 ntBASIC10.85□□□□□ -0.67
CtgfP29268 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CtgfP29268 AC166992.1-201ENSMUST00000216356 565 ntBASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms