Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gm15782-201ENSMUST00000121073 445 ntBASIC11.68□□□□□ -0.54
Nckap1P28660 Gm7150-201ENSMUST00000122032 981 ntBASIC11.68□□□□□ -0.54
Nckap1P28660 Gm8194-201ENSMUST00000159783 859 ntBASIC11.68□□□□□ -0.54
Nckap1P28660 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nckap1P28660 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Nckap1P28660 Gm6114-201ENSMUST00000182472 968 ntBASIC11.68□□□□□ -0.54
Nckap1P28660 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.68□□□□□ -0.54
Nckap1P28660 Gm3551-201ENSMUST00000190750 664 ntBASIC11.68□□□□□ -0.54
Nckap1P28660 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nckap1P28660 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nckap1P28660 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.68□□□□□ -0.54
Nckap1P28660 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC11.68□□□□□ -0.54
Nckap1P28660 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.68□□□□□ -0.54
Nckap1P28660 Prrxl1-205ENSMUST00000228878 723 ntBASIC11.68□□□□□ -0.54
Nckap1P28660 Mirlet7i-201ENSMUST00000083472 85 ntBASIC11.68□□□□□ -0.54
Nckap1P28660 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Nckap1P28660 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Nckap1P28660 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nckap1P28660 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Nckap1P28660 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nckap1P28660 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nckap1P28660 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nckap1P28660 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nckap1P28660 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nckap1P28660 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nckap1P28660 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Nckap1P28660 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nckap1P28660 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nckap1P28660 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.68□□□□□ -0.54
Nckap1P28660 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Nckap1P28660 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nckap1P28660 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nckap1P28660 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Nckap1P28660 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nckap1P28660 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nckap1P28660 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nckap1P28660 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nckap1P28660 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.67□□□□□ -0.54
Nckap1P28660 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nckap1P28660 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nckap1P28660 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nckap1P28660 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nckap1P28660 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nckap1P28660 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nckap1P28660 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nckap1P28660 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nckap1P28660 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Nckap1P28660 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Nckap1P28660 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.67□□□□□ -0.54
Nckap1P28660 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nckap1P28660 Gm22138-201ENSMUST00000158748 128 ntBASIC11.67□□□□□ -0.54
Nckap1P28660 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nckap1P28660 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.67□□□□□ -0.54
Nckap1P28660 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.67□□□□□ -0.54
Nckap1P28660 Gm2875-201ENSMUST00000211333 360 ntBASIC11.67□□□□□ -0.54
Nckap1P28660 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.67□□□□□ -0.54
Nckap1P28660 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Nckap1P28660 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nckap1P28660 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nckap1P28660 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nckap1P28660 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nckap1P28660 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nckap1P28660 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nckap1P28660 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nckap1P28660 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nckap1P28660 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.67□□□□□ -0.54
Nckap1P28660 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.67□□□□□ -0.54
Nckap1P28660 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nckap1P28660 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nckap1P28660 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nckap1P28660 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nckap1P28660 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nckap1P28660 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Nckap1P28660 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nckap1P28660 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nckap1P28660 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nckap1P28660 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Nckap1P28660 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nckap1P28660 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nckap1P28660 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nckap1P28660 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Nckap1P28660 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.66□□□□□ -0.54
Nckap1P28660 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nckap1P28660 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nckap1P28660 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.66□□□□□ -0.54
Nckap1P28660 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nckap1P28660 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nckap1P28660 Gm13182-201ENSMUST00000122241 312 ntBASIC11.66□□□□□ -0.54
Nckap1P28660 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nckap1P28660 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nckap1P28660 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.66□□□□□ -0.54
Nckap1P28660 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nckap1P28660 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.66□□□□□ -0.54
Nckap1P28660 Gm28324-201ENSMUST00000187913 264 ntBASIC11.66□□□□□ -0.54
Nckap1P28660 Gm17877-201ENSMUST00000192578 814 ntBASIC11.66□□□□□ -0.54
Nckap1P28660 Gm45113-201ENSMUST00000207518 165 ntBASIC11.66□□□□□ -0.54
Nckap1P28660 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Nckap1P28660 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.66□□□□□ -0.54
Nckap1P28660 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nckap1P28660 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms