Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc6P10629 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc6P10629 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc6P10629 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc6P10629 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc6P10629 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc6P10629 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc6P10629 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc6P10629 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
Hoxc6P10629 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc6P10629 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc6P10629 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc6P10629 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc6P10629 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Hoxc6P10629 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc6P10629 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Hoxc6P10629 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.94□□□□□ -0.34
Hoxc6P10629 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.94□□□□□ -0.34
Hoxc6P10629 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.94□□□□□ -0.34
Hoxc6P10629 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.94□□□□□ -0.34
Hoxc6P10629 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc6P10629 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc6P10629 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc6P10629 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc6P10629 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc6P10629 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC12.94□□□□□ -0.34
Hoxc6P10629 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc6P10629 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc6P10629 Gm15003-201ENSMUST00000118884 446 ntBASIC12.94□□□□□ -0.34
Hoxc6P10629 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC12.94□□□□□ -0.34
Hoxc6P10629 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc6P10629 Gm17214-201ENSMUST00000164501 541 ntBASIC12.94□□□□□ -0.34
Hoxc6P10629 Gm4895-201ENSMUST00000181646 1137 ntBASIC12.94□□□□□ -0.34
Hoxc6P10629 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc6P10629 Gm6423-201ENSMUST00000204315 934 ntBASIC12.94□□□□□ -0.34
Hoxc6P10629 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Hoxc6P10629 AC130477.1-201ENSMUST00000226982 420 ntBASIC12.94□□□□□ -0.34
Hoxc6P10629 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc6P10629 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc6P10629 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc6P10629 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc6P10629 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc6P10629 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Hoxc6P10629 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc6P10629 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC12.94□□□□□ -0.34
Hoxc6P10629 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc6P10629 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc6P10629 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc6P10629 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc6P10629 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.94□□□□□ -0.34
Hoxc6P10629 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc6P10629 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc6P10629 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Hoxc6P10629 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
Hoxc6P10629 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc6P10629 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Hoxc6P10629 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc6P10629 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc6P10629 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc6P10629 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Hoxc6P10629 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.93□□□□□ -0.34
Hoxc6P10629 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc6P10629 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Hoxc6P10629 Gm11502-201ENSMUST00000120917 1211 ntBASIC12.93□□□□□ -0.34
Hoxc6P10629 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC12.93□□□□□ -0.34
Hoxc6P10629 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC12.93□□□□□ -0.34
Hoxc6P10629 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.93□□□□□ -0.34
Hoxc6P10629 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC12.93□□□□□ -0.34
Hoxc6P10629 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Hoxc6P10629 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC12.93□□□□□ -0.34
Hoxc6P10629 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC12.93□□□□□ -0.34
Hoxc6P10629 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC12.93□□□□□ -0.34
Hoxc6P10629 Gm43671-201ENSMUST00000200422 433 ntBASIC12.93□□□□□ -0.34
Hoxc6P10629 Mt1-202ENSMUST00000211807 1085 ntBASIC12.93□□□□□ -0.34
Hoxc6P10629 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc6P10629 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC12.93□□□□□ -0.34
Hoxc6P10629 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc6P10629 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Hoxc6P10629 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc6P10629 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc6P10629 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc6P10629 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc6P10629 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc6P10629 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc6P10629 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc6P10629 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc6P10629 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc6P10629 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Hoxc6P10629 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc6P10629 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc6P10629 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc6P10629 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc6P10629 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc6P10629 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc6P10629 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Hoxc6P10629 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc6P10629 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.92□□□□□ -0.34
Hoxc6P10629 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.92□□□□□ -0.34
Hoxc6P10629 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc6P10629 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms