Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Gm24279-201ENSMUST00000104236 131 ntBASIC11.88□□□□□ -0.51
Hoxb3P09026 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Hoxb3P09026 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxb3P09026 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.88□□□□□ -0.51
Hoxb3P09026 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC11.88□□□□□ -0.51
Hoxb3P09026 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Hoxb3P09026 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Hoxb3P09026 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC11.88□□□□□ -0.51
Hoxb3P09026 Gm10731-201ENSMUST00000181171 448 ntBASIC11.88□□□□□ -0.51
Hoxb3P09026 Gm29651-201ENSMUST00000189088 697 ntBASIC11.88□□□□□ -0.51
Hoxb3P09026 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxb3P09026 Gm4482-201ENSMUST00000200876 742 ntBASIC11.88□□□□□ -0.51
Hoxb3P09026 Gm44158-201ENSMUST00000203881 505 ntBASIC11.88□□□□□ -0.51
Hoxb3P09026 Gm6905-201ENSMUST00000205729 511 ntBASIC11.88□□□□□ -0.51
Hoxb3P09026 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.88□□□□□ -0.51
Hoxb3P09026 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC11.88□□□□□ -0.51
Hoxb3P09026 AC121986.1-201ENSMUST00000218588 781 ntBASIC11.88□□□□□ -0.51
Hoxb3P09026 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxb3P09026 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxb3P09026 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxb3P09026 Gm5805-201ENSMUST00000072779 456 ntBASIC11.88□□□□□ -0.51
Hoxb3P09026 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Hoxb3P09026 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Hoxb3P09026 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxb3P09026 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxb3P09026 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxb3P09026 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxb3P09026 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxb3P09026 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxb3P09026 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxb3P09026 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxb3P09026 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxb3P09026 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxb3P09026 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxb3P09026 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxb3P09026 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxb3P09026 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxb3P09026 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Hoxb3P09026 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC11.87□□□□□ -0.51
Hoxb3P09026 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxb3P09026 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxb3P09026 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxb3P09026 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxb3P09026 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.87□□□□□ -0.51
Hoxb3P09026 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxb3P09026 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxb3P09026 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxb3P09026 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxb3P09026 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Hoxb3P09026 Crygf-202ENSMUST00000114027 594 ntTSL 2 BASIC11.87□□□□□ -0.51
Hoxb3P09026 Gm12857-201ENSMUST00000117678 592 ntBASIC11.87□□□□□ -0.51
Hoxb3P09026 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC11.87□□□□□ -0.51
Hoxb3P09026 Gm11956-201ENSMUST00000119525 512 ntBASIC11.87□□□□□ -0.51
Hoxb3P09026 Gm7113-201ENSMUST00000120477 958 ntBASIC11.87□□□□□ -0.51
Hoxb3P09026 Gm13740-201ENSMUST00000120590 310 ntBASIC11.87□□□□□ -0.51
Hoxb3P09026 Gm6027-201ENSMUST00000121467 756 ntBASIC11.87□□□□□ -0.51
Hoxb3P09026 AA623943-201ENSMUST00000121794 354 ntBASIC11.87□□□□□ -0.51
Hoxb3P09026 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.87□□□□□ -0.51
Hoxb3P09026 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.87□□□□□ -0.51
Hoxb3P09026 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Hoxb3P09026 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Hoxb3P09026 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Hoxb3P09026 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC11.87□□□□□ -0.51
Hoxb3P09026 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Hoxb3P09026 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxb3P09026 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC11.87□□□□□ -0.51
Hoxb3P09026 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC11.87□□□□□ -0.51
Hoxb3P09026 Gm8531-201ENSMUST00000188319 893 ntBASIC11.87□□□□□ -0.51
Hoxb3P09026 Gm42619-201ENSMUST00000197564 1136 ntBASIC11.87□□□□□ -0.51
Hoxb3P09026 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.87□□□□□ -0.51
Hoxb3P09026 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC11.87□□□□□ -0.51
Hoxb3P09026 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.87□□□□□ -0.51
Hoxb3P09026 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.87□□□□□ -0.51
Hoxb3P09026 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxb3P09026 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxb3P09026 Ranbp1-201ENSMUST00000052325 923 ntTSL 3 BASIC11.87□□□□□ -0.51
Hoxb3P09026 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxb3P09026 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxb3P09026 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Hoxb3P09026 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxb3P09026 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxb3P09026 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxb3P09026 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxb3P09026 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Hoxb3P09026 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxb3P09026 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Hoxb3P09026 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxb3P09026 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxb3P09026 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxb3P09026 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Hoxb3P09026 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.87□□□□□ -0.51
Hoxb3P09026 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.87□□□□□ -0.51
Hoxb3P09026 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxb3P09026 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxb3P09026 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxb3P09026 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxb3P09026 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxb3P09026 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxb3P09026 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.86□□□□□ -0.51
Hoxb3P09026 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms