Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.59□□□□□ -0.55
Pdlim1O70400 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.59□□□□□ -0.55
Pdlim1O70400 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim1O70400 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim1O70400 Mir5120-201ENSMUST00000175020 78 ntBASIC11.59□□□□□ -0.55
Pdlim1O70400 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.59□□□□□ -0.55
Pdlim1O70400 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.59□□□□□ -0.55
Pdlim1O70400 Gm38151-201ENSMUST00000195085 289 ntBASIC11.59□□□□□ -0.55
Pdlim1O70400 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.59□□□□□ -0.55
Pdlim1O70400 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim1O70400 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim1O70400 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim1O70400 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.59□□□□□ -0.55
Pdlim1O70400 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.59□□□□□ -0.55
Pdlim1O70400 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim1O70400 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Pdlim1O70400 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim1O70400 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim1O70400 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Pdlim1O70400 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.59□□□□□ -0.55
Pdlim1O70400 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim1O70400 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim1O70400 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim1O70400 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim1O70400 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim1O70400 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim1O70400 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim1O70400 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim1O70400 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Pdlim1O70400 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim1O70400 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Pdlim1O70400 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.58□□□□□ -0.55
Pdlim1O70400 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Pdlim1O70400 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Pdlim1O70400 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Pdlim1O70400 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim1O70400 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim1O70400 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.58□□□□□ -0.56
Pdlim1O70400 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim1O70400 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim1O70400 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim1O70400 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim1O70400 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Pdlim1O70400 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim1O70400 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim1O70400 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.58□□□□□ -0.56
Pdlim1O70400 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim1O70400 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.58□□□□□ -0.56
Pdlim1O70400 Gm23251-201ENSMUST00000103773 110 ntBASIC11.58□□□□□ -0.56
Pdlim1O70400 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.58□□□□□ -0.56
Pdlim1O70400 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.58□□□□□ -0.56
Pdlim1O70400 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim1O70400 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.58□□□□□ -0.56
Pdlim1O70400 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim1O70400 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim1O70400 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim1O70400 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.58□□□□□ -0.56
Pdlim1O70400 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.58□□□□□ -0.56
Pdlim1O70400 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.58□□□□□ -0.56
Pdlim1O70400 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim1O70400 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim1O70400 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim1O70400 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim1O70400 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.58□□□□□ -0.56
Pdlim1O70400 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Pdlim1O70400 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim1O70400 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim1O70400 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim1O70400 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim1O70400 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim1O70400 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Pdlim1O70400 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim1O70400 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim1O70400 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim1O70400 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim1O70400 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim1O70400 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim1O70400 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim1O70400 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim1O70400 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdlim1O70400 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Pdlim1O70400 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Pdlim1O70400 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Pdlim1O70400 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim1O70400 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim1O70400 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Pdlim1O70400 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Pdlim1O70400 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Pdlim1O70400 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Pdlim1O70400 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim1O70400 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim1O70400 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.57□□□□□ -0.56
Pdlim1O70400 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim1O70400 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim1O70400 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Pdlim1O70400 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim1O70400 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim1O70400 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim1O70400 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim1O70400 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms